NONHSAT099878

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT099878

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1702 nt

Genomic location

chr5+:469926..472762

Exon number

2

Exons

469926..470102,471238..472762

Genome context

Sequence
000001 GACTTCTTGA AAGAATCAAA ACTTGAGAAG TAACTGAGAA GTAGAAGCAG CTCTTAACAA GCATCAGGGG CTCAGAAGAG 000080
000081 GTAGCTCTTC CCAGGGCATC CAGCGGGCGA GCTGTTCCAT GTGCCTCTGA ACCCAGCTTC CCACTTAGCA GCAGGTCTTG 000160
000161 AGTGCAcctg gcatacaAAC ACCTGCCTGC CCACCCCCGG TGCTGAAGAC CGACCAGTCA AGGAGGTGTT GGTGGGAGTG 000240
000241 TTGTGTTCAC CATGTGGAGA TCAGGCGGCG ATTACCGCAT CTTCTTTGCT GACTTTGGTA ACCGGGTGTC CAGGGAGGAG 000320
000321 CGATCGGGAG TGGCCAAGCA GTTGCCTGGA CTCAGCTTCT GACTCTGCAG CTGGGAGTCA GATGCAGGCC CAAGGGTCCA 000400
000401 GGGGAGTTGT TCAGCGCCTG GAATCGCCAT GCATTGCGCG GTGGACCGCA CGACGCTCCT GCTCTGTTCT CCCAGGCACA 000480
000481 GACAGGCACT TGGAAGGCAG CTTTGCTCCT CTGGCCACCC GGAAACCTCC CAGCAGTTCA GATGGGACAA ACTGGGGGCC 000560
000561 TGTCAGAACA GCCACTTGTG CCGGGAAGGC CAGGCCCCGG CCTGCTCCGA TGAACGTCAG GACGGTGGCT GCAGCAGGGA 000640
000641 ACCAGGGCTG GCCTTGGATC TGTCCAGTAG GGTCACTGAC TGGGCAGGGC TTGCTGCATA GAGGATGGCT GCATTTTGTG 000720
000721 CTCAGAGTTG GTTGAAATGG CTACGAAGTG TGGAGAATAA CCACTGAATC CCAAAAAGTC ACTGCGCTTG ATCTGATCCA 000800
000801 AGTAACAGTG ACTGCAGTTA GGGTCGAGAG CTTCTCCGAA GCAGCGGTCA TGCAGGCTTT TGTGTGGCTG ACGCTTCCCT 000880
000881 TTTTCACAAC AGTAAAAAGC TATCAATGGG AAATTGTGGA CTTTTCCCAC CAGGGACTCA ATGGGGACTC AATGTGCAAT 000960
000961 ATTCAGTCAA CATAAAACTC TTTAAGAACT CCTCCTGACT GGTGACTGTC AACACTTGAT CTGAAACGTG AATAGTTTAA 001040
001041 TTTTCCTGAG CAAGGAGCTG CGAGTCTAGC TTTAGAAAAG CCCCTAGGAG TGTCCACCTC CACCACTTCC ACCGTGCAGG 001120
001121 CAGGTTTCAG GTGGGTTGGA CCCTGTGGGA CTTGCCGTCT GAGGGATGGA TGGACTCCGA GCACCCTCCC CGGCTCAGCA 001200
001201 CCCGCGGCCT CCGCCCACTC AATGGACTGT GCCTCCCAGA GCTTGGGCTG GATGGTCTCC CTGCAGAGGA CCAGGAGCTC 001280
001281 TGTCCAAGGC CTCGCCCTGG GACGCTGGAA GGGGTGGGAA GGGTCAGGGG TCCGGGGTCT AGGACAGGCT CAGGGGTCTC 001360
001361 AGCAGGTTCT CCTTGGAGGG CCTGAGCCTG GTAGGGGGGC GGTGCCCTGG GCCCCTCCAT GCCCCCTGGT TTGTTAAGGG 001440
001441 GGACAGAGCA GCTGCTGGGC CCCACCATCC ACTTAAGGAC TGGCCGTGAT TCTTGGCAAG CTCCGCCCGC CAGGCCACCT 001520
001521 CTCACCCAGC CAGGGCACCC CGGGCGACCT CCGCGCCAGG TGCGACAGCT CAGGCCGGAG ACCTCGTCTG TGGGGACGGG 001600
001601 CCGTGTCCGG GGCCGCCACC CTGAGACCGG GCGCGGGCAG GACGGAACCT GGGGGGGAAA CGGGGCAGGT ACTGGCTTTA 001680
001681 GGAGTCTAAA TCCCCAAACG CT
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Predicted Small Protein

Name NONHSAT099878_smProtein_428:700
Length 91
Molecular weight 9806.8726
Aromaticity 0.0333333333333
Instability index 59.7422222222
Isoelectric point 6.87188720703
Runs 9
Runs residual 0.0398589065256
Runs probability 0.0475966162241
Amino acid sequence MHCAVDRTTLLLCSPRHRQALGRQLCSSGHPETSQQFRWDKLGACQNSHLCREGQAPACS
DERQDGGCSREPGLALDLSSRVTDWAGLAA
Secondary structure LLEEEEEEEEEELLLHHHHHHHHHHHLLLLLLLLHHHHHHHHLLLLLLLLLLLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLHHHHHLLL
PRMN -
PiMo -