NONHSAT099832
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099832 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1435 nt |
Genomic location |
chr4_gl000194_random-:61660..115071 |
Exon number |
3 |
Exons |
61660..62949,112792..112850,114986..115071 |
Genome context |
|
Sequence |
000001 ACTTCGCCAT TTTCCTCCGG AAGTGCGGAT CCCAGCGGCG GTCGTGTAGC TGAGCAGCCC TGGGGCTTGG TTCTATGTCC 000080
000081 CTGTGGCTAT GTTTCCAGTG TCCTCTGGGT GTTTCCAAGA GCAACAAGAA ACGAATAAAT CTCTGACCCT TCTCAGGTGC 000160 000161 AGCCAGAGAG ACACTAGCCC ACTGATGGAT GGACAGACGT GGGCAGGGTC CGTGTCACTA AACCACCCAC CACTGCCACA 000240 000241 GCTGCCTACA ACAGACACAT CAGATGACAC TCCGGGCAAA TAAATGATTT TCACTGAGGA CTTACTGGTT TTAATAATAG 000320 000321 GTCCTGGTGT AGAGAAGTCC CTCAACCTAT TGTGCAATGA GTTTTGAGAA GCGGGTAAGC TGTATGTTTT GTGGTTCTGT 000400 000401 TTCATAAATG CATCTACAGG AAGACCAATA TTGACTGAAT GAAGCTTTCA TTTAAAGAGC TAAAATATGC TTTGTGTTTT 000480 000481 TATATGTGGA TACTACTTTA AACCTAATGA CTATTCATTG TATCATAGCT TGTGATGTAT TCTGCTCACG GCTTTTAAGG 000560 000561 TAAATTGTGC CATGATCCAC TGCCATTCTA ATTGCTTTAA CAAGTCATTA CCACACTACT GTTACATCTT AATTATGCAT 000640 000641 ACAGACAGGT AGACTTATTT TACATATGTG AACTAACTAG TTGTCAAAGC AAATGCAGAT TGTATTCTAC AAGTAAAGTC 000720 000721 TTTTTCTCTC TGAAATTTCT AGGGATGTTC TTTAAGTGAA ATTCATATTC AAACTGAAGA TTTTAGTTAC AAGAACTGAG 000800 000801 TGCAGATTAA AGTCTTTTTG TGATTCAAAC ATAGTCAAGA GTACAACTGT GATATTTCAT GGAAGTTATG CAATAAAATG 000880 000881 TCTCTAACCT GCGAACAAAT CTATCAAGCA GACGGCACAG TACTGAATTT GAAACCAGAA ATACTGGGTT TTTATATAAA 000960 000961 TGCTTCATAG ATTTGTTTTA TGATAAAGGG CACATAACTC TCCTAAACCT CACACCACCT CTTGAATAGG TATAATAAGT 001040 001041 CCACATCAAT GCTGATGCCT TAGCTATTAT TAAACTCTTA CAGTATGATG TAAAGTGAAA GTACAATGTA AGATCATTCC 001120 001121 TAGGCCAACT TTGACCAGTT TTATACAGAA ACATGTGCCA ACTTTTCTGT TTGCAAGGAT AATATCAAAG CAAACACCAG 001200 001201 AAAGTTATAT CTTTGATGCA TTTTTTTCAA AATCATACAC ATAATACACA AACCAAAGAC AAATGATGAA TATTATGTCA 001280 001281 GAAAATATAA AGTCTTCCCC TTTCTTCTTT TGCCAAGAAA GTCCAATATT TTCACCATTT TTATGCACAC AATCAACTTT 001360 001361 ATTTAAGCTG GAAGTTAATG TCTCATTGTT TTCATTGTTC TAAATAAACA CCTTTTCCCT TGAGTATTGT TCTAA |
Predicted Small Protein
Name | NONHSAT099832_smProtein_1262:1402 |
Length | 47 |
Molecular weight | 5331.2269 |
Aromaticity | 0.173913043478 |
Instability index | 97.9934782609 |
Isoelectric point | 4.78338623047 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0189643424938 |
Amino acid sequence | MMNIMSENIKSSPFFFCQESPIFSPFLCTQSTLFKLEVNVSLFSLF |
Secondary structure | LLLHHHHLLLLLLEEELLLLLLLLLLLLLLLEEEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |