NONHSAT099690
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT099690 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2446 nt |
Genomic location |
chr4-:188225237..188426767 |
Exon number |
5 |
Exons |
188225237..188225621,188225792..188226855,188228260..188228423,188230336..188230832,188426446..188426767 |
Genome context |
|
Sequence |
000001 AGCTGAGGGA GCGGGCTCCT CCTTGGCCAG CCCAGAAAGG GGCTCCCACA GTGCAGCGGT GGGCTGAAGG GCTCCTCAAG 000080
000081 TGCCCCCAAA GTGGGAGCCC AGGCAGAGGG GGCGCCGAGA GCGAGCGAGG GCTGTGAGGA CTGCCAGCAC GCTGTCACCT 000160 000161 CTCACAAGGA AGGCCGCTGT GGAGCGTGGA GGAAGCGCTC CCGGGCGGGA AGGCCGCTGT GGAGACTGGA GGAAGCGCTT 000240 000241 CCGGGCGGGG AAGGCCGTTG CGCAGCCTGG AGGAAGCGCT TCTGGGTGGG GAAGGCCGCT GGGAGCATGA ACTTCTGAGC 000320 000321 AGTGGTCTGA AATTGAACTC ACAATATTTC TGAGGCATGC CTGTACTGCC CTCTTCCAAG AATGCCTACG TGACCAGCCC 000400 000401 TCAGACTGGA TCTTCTGCCT CCAAATTATG TTTGCAGTTC ATGTAGCAGG CATAACAGAC TTCGATTCTA ATAGTTGCCT 000480 000481 TCTTGCAATC TCTAGTAGCT GCAGCAACCT CCCACTGCAG ATGTCTATTG TGAATCTGGG CCCCTGGCCC TTGGTCTACA 000560 000561 TCTCACGTAC ATTCAGCCTT CTTGCACTTC CAGCCTCTTC TCCTTGTGGC TCTCTTGCCC TGTCACTTTG CTTATGTGCA 000640 000641 CTGTGGCCAA AGCTAAGGCA CCAGGGAGCA TCAAGAAAAG ACAAACATCT GTGAGTTGGA TATGTGCCAA TATTGATATT 000720 000721 CTCTTATACC TCAATGCCCT GTGCTAGAGT GTCAGAGAGG AAGCGCAGAA TGCAGCCATA CTTCTTTTCA ACCTACTGGT 000800 000801 CAAATTTGGG TGGTTCAAGT GATCTGAAAC TGAGCTCACA ATATTTCTGA GGCATGCCTG TACTGCCCTC TCCCAAGAAT 000880 000881 GCCTACGTGA CCAGCCCTCA GACTGGATCT TCTGCCTCCA AATTATGTGA GAGACTGAGA GCTCTCTCTC TTCATTTCCT 000960 000961 CGTAAGGCCA CCAAACCCGT CAGCACCTAC TTACCTGACC ATTGTCTCAA CTACAGCTGA TGGGATCCAT GACAGAAGCT 001040 001041 TAACCAAAAC TAGCCCATGA GATTGTTTTT CTCAGGAATG TAGAAATGAG GCAGAGGTTA GCCACTGTCC GTGTGCTCTG 001120 001121 GAGCTAAACG CATGTAAGTG TAAGGGTTCT CTTCTGTCCT AAGCTGACAC AGGCTGCAGA GAAAAGTGGT TGATGCTGCC 001200 001201 AGTCAGAGAG AAGCAGATGA AGGAGCCATG CAGCCTGGAA GGCGAGAGGA GGGCCAAGAA AATGAGCTTG GTTTCCAACG 001280 001281 GGTTCCGCAA TTGCTATTTT CGGTGGCTGC TGAGCCCAGG TGCTGTTTCT TCACTTGAGC TCCATGACCC TCCCTGTGTG 001360 001361 GTGGGTTGAA CGGTGACCTC CAAAAGATAT GTCCACCTGG AACCTCAGAA TAAGATCTTA TTTGGAATAG TCTTTGTAGA 001440 001441 TGTCAGTAAG GTAAAGATTT GGAGATGAGA CCCTCCTGGA TTAGGGTAGG CCCTAGGTCC ACTGGCAGGT GTGCTTCTCA 001520 001521 GGGTCTGAAA GGGGAAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG GAGACGGAGG 001600 001601 CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA GAGACAGGGC 001680 001681 CACCCAGAGG AGGAGACGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA CCCAGAGGAG 001760 001761 GAGACGGAGG CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA GACGGAGGCA 001840 001841 GAGACAGGGC CACCCAGAGG AGGAGACGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA GACAGGGCCA 001920 001921 CCCAGAGGAG GAGACGGAGG CAGAGACAGG GCCACCCAGA GGAGGAGACG GAGGCAGAGA CAGGGCCACC CAGAGGAGGA 002000 002001 GGCGGAGGCA GAGACAGGGC CACCCAGAGG AGGAGGCGGA GGCAGAGACA GGGCCACCCA GAGGAGGAGA CGGAGGCAGA 002080 002081 GACAGGGCCA CCCAGAGGAG GAGGCGGAGG CAGAGATTGG AGTGATGCTG AGACAGGCTG GGCCGAGGTC CGCCAAGGGC 002160 002161 TGCCAGGCAG CCACCAGAAG CTGGGAGAGA GCCAAGCAAG GACCCCCCGC TGAGCCTTCC GAGAGAGCGC GGCCTGCTGA 002240 002241 CACCTGGGTG TCAGACTTCT GGCCTGCAGA CTGTCAGAAT AAGCTCCTGT TGTTTTAAGC CACCTGGTTT ATGGTAATTT 002320 002321 CTTGCAGCAG ACCTAGCAAA TTAATAGACC CCATAGTCCT GTAATTCATT TTGCTTAAAC GAGCATGAAT AAGATTTAGT 002400 002401 TTTGCTAATA AATAAAAGTT ACTTCACTAA GAAAAAAAAA AAAAAA |
Predicted Small Protein
Name | NONHSAT099690_smProtein_356:445 |
Length | 30 |
Molecular weight | 3073.5619 |
Aromaticity | 0.0689655172414 |
Instability index | 86.3068965517 |
Isoelectric point | 9.18743896484 |
Runs | 5 |
Runs residual | 0.0271551724138 |
Runs probability | 0.0351174704116 |
Amino acid sequence | MPVLPSSKNAYVTSPQTGSSASKLCLQFM |
Secondary structure | LLLLLLLLLLEELLLLLLHHHHHHHHHHL |
PRMN | - |
PiMo | - |