NONHSAT099197
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT099197 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
583 nt |
Genomic location |
chr4+:172034940..172035732 |
Exon number |
2 |
Exons |
172034940..172034963,172035174..172035732 |
Genome context |
|
Sequence |
000001 AAAATTGAGC TCTCTGTGCA GCCACAGGTG AACACAGATC TGACTGCATG CCTGCAAAAA AACTGTCACA GAGATGTCTC 000080
000081 TATACTGAAT GCCAGAGTGG GTTAGAGAAC ACGCCTCTGG CTATGTCAAC AGAGATTATT CACCTTTCCC ACAACGGTAG 000160 000161 TACAATCAAG TCAGTCGATC TCATCTTCAT GAGACTCTGG ATCTACAGCC ATCATTTCTA AAACAAATGC AAACGAAGGT 000240 000241 ATATTTTGGG GTGAGCAAAG GAGCTTTCTC TGTGTGGGGT ATCATGTCTG GGAAACCTGA CGTTGTTTGT GTAGAAGGCT 000320 000321 CATAAAGTTC CTGTAAAGAA TTCTGATCAA GACTCCGAAA ATTTATCTGG AAGAGAATCT TAATTCGCCA TCAAGAAGAC 000400 000401 ATTCCTTTTT ATGGTTCAAA TGATGAAATG GACACTAAGG AAATTTTCCA TTTTTGCAGA AAAAGTATTC TGTGTTAATG 000480 000481 GAACCGGAGG AAACCACATG GCTTTGGTCA GCTGCATCAG TTCTTAAATG CCAGAGAATG TGCAGATGTT TTCCAAATGT 000560 000561 TCTTTAATAT GGAAGGACAA TGA |
Predicted Small Protein
Name | NONHSAT099197_smProtein_47:220 |
Length | 58 |
Molecular weight | 6578.5992 |
Aromaticity | 0.0877192982456 |
Instability index | 55.7105263158 |
Isoelectric point | 7.86468505859 |
Runs | 9 |
Runs residual | 0.00394736842105 |
Runs probability | 0.0452216922805 |
Amino acid sequence | MPAKKLSQRCLYTECQSGLENTPLAMSTEIIHLSHNGSTIKSVDLIFMRLWIYSHHF |
Secondary structure | LLLLLLLLLEEELLLLLLLLLLLHHHLLEEEELLLLLLLLHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |