NONHSAT098864
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT098864 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1776 nt |
Genomic location |
chr4+:155548097..155621052 |
Exon number |
3 |
Exons |
155548097..155548301,155557481..155557548,155619550..155621052 |
Genome context |
|
Sequence |
000001 TCGGCCAGTA GGTGTCTCTG CTCCTCGGGC GGCCTTGAGC AGTGCCTAAC GTTGAGCGTG AGGCTCGTGC TCCGGGTCTC 000080
000081 GCGGGCGGCC GCCTCGGGCG TCGAGTCCCG GAGATTGGAC AGACACCAGA GCCTGGGGAC CGCGGAGTGA CCGGGTGGGG 000160 000161 CTGGAGGGCG GCGCCGCGCC TTCTGGGGAG ACGCGGAGGT ATCAGGACCT GGGCTATGCT CCTGATTTTA TACAGACTGC 000240 000241 CATGGCTCCA GATATAAAAG ACCAAATAAA AAGTTACCTA CCAGACACTG ACTATCTTAA ACACCGAAGC ACAAGAATGC 000320 000321 TCCAAAGAAG AGGTCTATAT TGCTTGGCTC ATATTAACTT CTGTTTATTT TCTTACGATT AAGGCTCAAA CGTTGTTAAA 000400 000401 AAATGTTCAA ATCCTACAAG ACACTGACAT GCCAGTTCCT CAGCTTTGAT GGAGAAACCA GCTTTCTCTT CTTGCAGAGA 000480 000481 TACTCTTCAT GAAAAGTGGA GCTCCAAGAA GAGTAGACAT GAGGAAAATA TGAATTTTTA CAAAAGGAAA TGTATGGTGC 000560 000561 AATTATAAAC TGTAGCATGA ACCCATAATT GGAAGTCTAC ATCTCACAGT TATAGTCAAG AATTCTGGTA CATATAAAAT 000640 000641 AAGTTCTTTC AAAATGGGAT TCAGGTATTA TTTAGAAATG CATCTACTGA AAAGAAGCAT ACCATAAAAA TTTATGCTAA 000720 000721 TTATGGATGA GATCATGGAC GGTTTAATCG AAATTACGAG TTGGATTTGT CAGATGTAGA GTCTCAATCA GGCCACTTGA 000800 000801 AAGACCAAAT GATTTCCTTT TCATCTGAAA GGTTCAGAGA GGAAGCTTTT GAAAAGACAC TATTGAAATC TTCAAGGTAG 000880 000881 CTGTTCCTAG CACAGCTTTG ATTTCTAAAA TAACTAGAAG GACTGTAGAC CTACATGAGG GGAGAGAAGA GAAACTGAAG 000960 000961 AATTGTTAGA AAACATAAGT TTTCTTTACT TCTAGTACCA CTCCACGCTT TGTGAAAAAA GTTATTTTAT GAAGTCAAGA 001040 001041 AGTCAATCAG AAGAAACACC AGGGAAAGTC AACACAAACT GGTTTATCTA ATACTTTTTC AGTGTCCAAT TTGCAATGCA 001120 001121 CTGAGTTCCC TGCTAAACTA TGTCTATATA TTGGGGGCTG GGAGAGGAGT AGGTTAAAAA TAAATAGGAG TTGCAAGTCT 001200 001201 TTCTCCTCGG GCTACTAATA ATATAcctga attttatgtt tgattttgtc ttccttgtct ttatagtttt tgcaactaat 001280 001281 gtatatatgt ctaaacaatc tattgcttaa atttacataa ttttcagctt tacatatgta gaatcatgct gtttgttttc 001360 001361 ttctgtacct cagttttttt cactaaaaat tgtcttctga aaaaaaaaag cggaggtatc atacttcctg atttaaaatt 001440 001441 atattacaca gctatagtaa acaaatcagt atagtactta ctcaaaaaca gacacagtga aacagaatgg agtccagaaa 001520 001521 taaattcaaa catatacagt aaactaattt ttgacagaga caccaagagg atacagtggg aaaaggttag gctcttcaat 001600 001601 aaatagtgct gggaaaattg aatttccaca tatatgcaaa atttataaaa tataagacct aaaactataa aattccttaa 001680 001681 agagaacaca aaaagctcct ggacattggc cttggaaata attttttgga tatcacacca aaaaatggaa aaaaaaaaag 001760 001761 ctcaggctac aaaagc |
Predicted Small Protein
Name | NONHSAT098864_smProtein_1235:1309 |
Length | 25 |
Molecular weight | 2818.3521 |
Aromaticity | 0.25 |
Instability index | 63.4166666667 |
Isoelectric point | 5.58721923828 |
Runs | 4 |
Runs residual | 0.0684523809524 |
Runs probability | 0.0356385797564 |
Amino acid sequence | MFDFVFLVFIVFATNVYMSKQSIA |
Secondary structure | LLLEEEEEEEEEEEEEEHHHHHLL |
PRMN | HHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | i??????????????????????? |