NONHSAT098298

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT098298

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1772 nt

Genomic location

chr4+:130701165..130876523

Exon number

16

Exons

130701165..130701254,130724147..130724270,130728159..130728303,130733157..130733220,130733817..130733915,130734829..130734940,130746495..130746607,130755365..130755479,130758526..130758580,130783723..130783923,130821693..130821809,130829789..130829858,130870232..130870292,130874429..130874494,130875533..130875731,130876407..130876523

Genome context

Sequence
000001 GATGCACTCC TAAGAGAAGA CTACCTGAAA GGAGTGTACA CTGGTCTAGC AGTTGAGATC AGCTAGTGTT CCATCTATCT 000080
000081 TCTGTCATGT GGAGGAGTTC TTGCTCTGTC ACCTAGTCTG GAATGCAAGG GCACAATCAT AGCTCACTGC AGCCTCATAC 000160
000161 TCCTGGACTC AAATGATCCT CCTGCCTCAC CCTCCTGAGT AGTTGGGACT ACAGGCTATA CTGGTTATTG TGGATCCAAA 000240
000241 AATCCTAGGA CACAGACTTT GCCCTCAAAT TATTTACTGC ATAGTGGGTG GCCTGAAAAG CAAACATAAG CACTAAATAT 000320
000321 GGAAAAATGC AAAAGGCAAT GGGACCATAA AAGGAACAGA TCTCTTCTAA GATGTCTTGA TCGACTGACC CCAAAGCCAG 000400
000401 AGGGTACCAG GTCAAAAAGC AAGAAAACAA ACAATACTGA CATTAGAGAG AAGCAAAGTT TCTATAGAAA ACCTATTACA 000480
000481 CTGTGGTATA AATCAAGATG AACCTGCAGA CATCTATTTT AGTTTGGAAG TCTGGAAAAG TTCAAGATTG GCCATCTGCA 000560
000561 GCTGGTGAGA GCCTCAGGCT GCTTCCCCTC ATGGTGGAAG GTGAAGGGGA GCTGGTGTGT GCAGAGATTA CATGCTTTTC 000640
000641 TAGGTCATCA TTCTAGGCTT TGTTGAAGCA TGCATTTTTG GCATGAGGGT GGCAGCCTTT GCACTATGTG CATGGCTGAG 000720
000721 GAGTTAGGAT CTGGAGGGTG ATGAAAGCAA AGGTGCTGCT GGTTACTCTT GGTTCATCTA GCAATAGATG ATCTGAATGT 000800
000801 TAGAGTTCGC CAAATATTGT TCCTGGGCAG TCTTTGCTCT ACCAAATCAA CTTTCTCCAT GGGGGAGCTA GAAGTCACCC 000880
000881 CACATTCTCC GCCATGGCCA GCTCTACATT CTAAGAGAAC CAATGGCTCT ACCCAACATA TTCTTCTCAC CACAGATGAC 000960
000961 AAAGACACAA GGAGCCAAGA CAGATCATTC AAGCATATTC ATTGCCTCTA TCTTCATCCC ATTAAATAAC ATCCCGCCAA 001040
001041 CCAAAGCAAG TTATCTGCAT AAGAATAAAT ATTCCACCTA CTCTACTGCA AGGCCCTGCA AGAGTCATGA GACAAAAGGA 001120
001121 TCCTCTGTGG ACAGCACCCA AGATGGAAAC AACTGACAGT CTATGGCCAG GGCTATACTC TGGTGAAACT GAAAGGTCTG 001200
001201 CATGGAAGTG TCTGACTACC ACCATCCACT CAGGCAAATG CATTTGTTTC CCTCTATTCA TTATTAGAAG AGAGGAGATT 001280
001281 ACATACCAGA CATATACCAA TAGGTTTTCT CTTCATAATA CCTACGTCAT CTAGTAGCAT AACATAAGGC AGAATCCTTC 001360
001361 AAAGATTTTC ACCTGAACTT TTCTTGAGCA TCTCTAGACA GTCACATGCA GAATAACAAC TGGGTTTTAG GTGTACCAAG 001440
001441 TTCTTAGTAT GGAAAAAAGA TATCCTACAA AATTTTGTCT CTACACATGT TGAAGTTCAT CTCTCACCCC TCTCTACTCT 001520
001521 CTTACTTATG CTTCAAGCAA ATGGAATTAC TTTTTTTCAT ACTGAGACAT TAAAACAGGA AATCCTTCTT CCTAGGACTC 001600
001601 CTGTTCACCA CCACTACCTC TACACATAGC AGATCCACGT AAGACACTTG CATCCAAGAC AAGTCAGAAT GATTACATAT 001680
001681 GAAAGTTTTA ATTGCACTGT ATGGGGATAT TGCTGTGTTG TGAATTAAAT AAGAATTCAT ATTTTCAAAA AAAAAAAAAA 001760
001761 AAAAAAAAAA AA
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Predicted Small Protein

Name NONHSAT098298_smProtein_1106:1333
Length 76
Molecular weight 8877.1067
Aromaticity 0.133333333333
Instability index 51.7346666667
Isoelectric point 8.53582763672
Runs 12
Runs residual 0.0110638297872
Runs probability 0.0289922275217
Amino acid sequence MRQKDPLWTAPKMETTDSLWPGLYSGETERSAWKCLTTTIHSGKCICFPLFIIRREEITY
QTYTNRFSLHNTYVI
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHEEEELLLEEEEELEEEEEEEEEEE
EEEELEEEEELEEEL
PRMN -
PiMo -