NONHSAT097840
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097840 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2048 nt |
Genomic location |
chr4-:113150717..113152752 |
Exon number |
1 |
Exons |
113150717..113152752 |
Genome context |
|
Sequence |
000001 CCTGGTTCAG CCGCCTCTGC CTGCGAGACG GTTCAATTCC TGCGTGCGGA CGTTTGTTTT GTTGGACCTT GACCTGACTA 000080
000081 GGAAATTTCC CTCTCTCATT GCAGTTTCGG GCATCCTCGT CCGGAGCACG CTGGGCGTGG CATGGCTAAG GCTCAGCCTT 000160 000161 CGAACTTTGT ATCAAAGGCG TGTGAGGAGC CAGAGTCCCA GGCCGGAAGT CATAAGTGCG AAGGGGCGTT TCTCTGCACG 000240 000241 GTGTGCTTAG TTTTTGTTAA TACTGCACCA TAAGCGGAAA ATAGACTCGG GAACTGATTG AGGTTACTTT GAACGCACCA 000320 000321 AGATTTTTTT CCGGTCTCTG GTTTGTGTCT TAATTTCCAT ACTGTTAATG TTTTAGGGAA ACGTAATAAT GGTGCATTAT 000400 000401 TGTCCTCGTT TTGTTTGAAA ATCAGATCTT CACATAATTT TGGGTTGGGT AGTTGGGGTT CAGAGGAAAT TGGCAAGAGG 000480 000481 GCTGGGGTTT TTCGGGGACG TCAGCGTTGC CATTCCAAGC ATGCTGCCCA GAACTGCTGT AGATGGGAAG AGAAAGCTGC 000560 000561 TCTAATGTGT CCGCAGCCCT CTCAAGTGCT ACCATATAAT TCGCGTCTTG TTTGGCCTCA AGACAGTTGG CCTCACAATA 000640 000641 GATATAAGAT GTGGTTTAGT AGACACCTCG TCCAGTGGAT AGGAGGATGC TCTCATGGAC TGGACACATC AAGTTTTTAG 000720 000721 CCTGTTTAAT TAAACCTAGA AAAATTGTTA CATTTTAGAA AGTTTTTATT GATGATAAAA TGTTCTCTGA ACTCATTTTC 000800 000801 TTGCTTCTTT AAATACGTAT CTGGTTTCAA TCTTAGCACT GCTACTTACT AATGTTTATT TTATTTGGGT TTTAGTTGTT 000880 000881 TTGTAATCAG AAGCATAGGA TAACATTTGT CCCAATGGTT TGCTTTCAGT GAATGTTGGG ATGACCGAAT GACTTCCTAG 000960 000961 TGAAAGCATT TTCTTTTCTC CTTCCAACCC GTGAAATTAG ACAAATGTAT TAATGAAATA ATCATTAAAA TTCAACTATA 001040 001041 AATGTTTACA GAAACTGGTA CATCTATCCT ATGGAATATT TAGTAACAAA TAGGAACACA GTATTGATGA ACACACCCTG 001120 001121 AAATGAATCT GTAGGAAATT ATGGTTAAAG AAAAAGCCAA TCTCAAATGC TTATATACTG TGTAATTCCA TTATGTAACA 001200 001201 TCTCAGAATT GATAAATTTA TGTAAGTGGA CAACAGAATA ATTGATTGCC ATGGGTCAGG GAATGGAAAT CCTGCATCTT 001280 001281 GTCTATATTA ATGTCAGTAT TCTGGTTGTG ATATTGCAAT AGTTTTGTAA CATGTCACCA CTGGGGGAAA CTAGATTAAA 001360 001361 GATATACACG GTCATCTGTA TATTATTTCT TAAAACTGCA TGTGACACAA TTGTCTCAAT ATAAAAAGTT TGATTAAAAA 001440 001441 AATGCAGCTA TAGACTTGAC AGCACTTCCT ATAGACATTC TATAAACCGT TATTAAAACT GAATCTCACT TAAAAATAAT 001520 001521 TTTTTTATAG TAAATCTGTT CTCTCAGTTA AGGATATGAA TGATCCTCAG AAGCAATACA AATGAATAAG ACATTTAAAA 001600 001601 ACTTCACTAA GCAAAATAAT GCAAATTAAA ATGCATGTTT TAGTCATTTG TATTGATTCA CTTGTCAAGT TAACAAAGCT 001680 001681 TTACAGTTAG AAATATTCAG TATTTGCAAG GATACAATGA AATGGTACTA TTCTAAACTG CTGCAGATAA TGAAACTCAT 001760 001761 TCTGAGAAAT TATTTGGAAA TACCAAGAGC CAGAAACAAA CTAAATGCTC AAAAATTGAA GGATGATTAA ATTTGCTGGT 001840 001841 GTATTCTTGT TATATAGACA TAATAAATAT ATTTTTTAAA ACAATATGGA AAAATGCTTG CTGAATAATG TGTGAAAAAT 001920 001921 CAGGATAGAA AATTATATGT ATGTTCCAAA TGATGTTTAA AACAAAACAT ATACATTCTT ACATTCTTTC TTACACGTGT 002000 002001 TTCTTGAAAA TAAAGGCTGG ATGGTAAATA CCAAAAAAAA AAAAAAAA |
Predicted Small Protein
Name | NONHSAT097840_smProtein_1331:1423 |
Length | 31 |
Molecular weight | 3343.0708 |
Aromaticity | 0.0666666666667 |
Instability index | 44.7733333333 |
Isoelectric point | 7.79986572266 |
Runs | 6 |
Runs residual | 0.00225225225225 |
Runs probability | 0.0888977212505 |
Amino acid sequence | MSPLGETRLKIYTVICILFLKTACDTIVSI |
Secondary structure | LLLLLLLEEEEEEEEEHHHHHHHLLLLEEL |
PRMN | LLLLLLLLLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiiiiiiiiTTTTTTTTTTTTTTTTTTo |