NONHSAT097815

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT097815

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2341 nt

Genomic location

chr4+:111337054..111339660

Exon number

2

Exons

111337054..111337164,111337431..111339660

Genome context

Sequence
000001 ATGTTATGTA AAGAAGCCAC CAAGAAGAGC AAAGAAAAGG AGCCAGGGAT AGCAGCTCTT CCTCAGGGAC ACTTGACTTT 000080
000081 CAGGGATGTG GCTATATAAT TCTCAGTGGA GGAGTGGAAA TGCCTGTACC CTGTGCAGAG GCCTTTATAC AGGGACGTGA 000160
000161 TGTTGGAGAA CTACAGGAAC CTAGAGTCTG TGGATAGCTC TTTAAAATCC ATGATGGAGT TCTCATCAAC AGGGCAAGGC 000240
000241 AATGGGGAAG TGTTCCACAT AGGGATTTTG GAAAGACATG AAAATCATCA CACTGGAGAT TTTTGCTTCC CAGAAACCGA 000320
000321 GAAAGATATT CATGACTTTG AGTTTCAGTG GCAAGAAATG GAAAGAAATG GCCATGAAGC ACCCATGACA GAAACCAAAG 000400
000401 AGTTAACTGG TAGTACAGAC TGACATGATC AACGGCATGC TGGAAACAAG CCTATTAAAG GTCAGCTTGG ATTAAGCTTT 000480
000481 CATTTGCATC TGCCTGAACT GCACATATTT CAGACTGAAC AGAAAATTGG TAATCAAGTG GACCAGTCTA TCAATGATGC 000560
000561 TTCCTCAGCT TCAACATCCC AAATAATTTC TTGTAGGCTC AAAACCCATC TTTCTAATAA GTATGGGAAG AATTTCCTCC 000640
000641 ATTCTTCATT ATTCCCACAA ATACAGGAAG TACACAAGAG AGAAAAACCT TTCCAATGTA ATGAGTATGG CAAAGCCTTT 000720
000721 AATTATAGCT CACACTTAAG GAGACATCAC ATAACCCATT CAGGAGAGAA ATAATGTAAA TGTGATGTAT GTGGCAAAGT 000800
000801 CTTTCATGAG AAGTAATACC TTGCATGCCA CCATAGAGTT CATACTGGAG AGAAACCTTA CAAGTGTAAT GAGTGTAGCA 000880
000881 AGACCTTCAA TCAGAAGTCA TCCCTTCAAT GCTGTCATAG ACTTCATACT GGACAGAAAC CTTACAAATG AGAAGAATGT 000960
000961 GACAAAGTTT ACAGTTGCAG ATCACAACTT GAAACACATA GGAGAATTCA TACTGGAGAA AAACCATACA AATGTAAGGT 001040
001041 TTGTCACAAG GCTTTCTGGG ATAATTCATG CCTTTCACAC CTGAAGAGTT CATACTGGAG GGAAACCTTA TGAGTGTAAG 001120
001121 GTTTGTGACA AGGTTTTCTG GCATGATTCA TGCCTTGCAC AACATCAGAG AGTTCATACT GGGGAGAAAC CTTACAAGTG 001200
001201 TAATAAGTGT GGCAAGACCT TTGCTCAAAA TTCAGGTCTT GTAATGCATA AGGCATTTCA TAATGGAAAG AAACCTTACA 001280
001281 CATGTAATGA ATGTGGCAAG GTTTTTAGTC AAAAAGCAAA TCTTGTATGT CATTATAGAT GTCATACTGG AGAGAAACCA 001360
001361 TAGAAGTGTA ATGAGTGTGG CAAGACCTTC ACTTGAAATT CAGCCCTTGT AATTCATAAA GCAATTCATA CTGGAGACAA 001440
001441 ATCTTACAAG TATAATGACT GTGGCAAGGT TTCTtttttt tttctttttc tttttttttt ttttgagaca gagtctcact 001520
001521 ctgttgccca ggctggagtg cagtgacgcg atcttggctc actgcaacct ccacctccca ggttcatgcc attttcctgc 001600
001601 ctcagcctcc tgagtagctg ggactacagg tgcccaccaa cacgcctggc taattttttg tatttttggt agagacgggg 001680
001681 tttcaccatg ttgtccagga tggtctcgat ctcctgacct cgtgatccgc ctgcctcggc ctcccaaggt gctgggatta 001760
001761 caggcgtgag ccaccacacc cagccGAATG TGGCAAGGTG TCTAATCAAC AATCAAACCT TGCACAACAT CAGAGAGTTC 001840
001841 ATACTGGAGG GAAACCTTAC AAGTGTAATG AGTATGGCAA AGCCTTTAGT GGGCAGTCAA CACTTATTCA TCATCAAGCA 001920
001921 ATCCATGGTA TAGGGAAACT TTACAAATGT AATGATTCTT ACAAAGTCTT CAGTAACGCT ACAACCTTTG CAAAACATTA 002000
002001 GAGAATCCAT AATGAAGAGA GATCTTACAA GTGTAGTAAA TGTGGCAAAT TTTTCAGATA TCGATCATAC CTTGCAGTTG 002080
002081 ATTGGCGAAC TCATACTGGA GAGAAACCTT ACAAATGTGA TGATTGCGGC AAGGTCTTCA GTCAAGCTTC ATCTTATGCA 002160
002161 AAACATAGGA GAATTCATAC AGGAGAGAAA CCTCAAGTGT GATGATTGTG GCAGTCTTGA CTTCACTTTC ACACAGGATT 002240
002241 AAACATCAGA GAATCTATAC TGGACAGAAT CTTAAAAATG TCGTAAGTGT GGCAAGGTCT TCAGTCCGAG GTCAATCCTT 002320
002321 GCAGAACATC AGAAAATTCA T
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Predicted Small Protein

Name NONHSAT097815_smProtein_1067:1243
Length 59
Molecular weight 6653.8823
Aromaticity 0.0862068965517
Instability index 55.6379310345
Isoelectric point 10.612121582
Runs 12
Runs residual 0.0503031451307
Runs probability 0.0374197727138
Amino acid sequence MPFTPEEFILEGNLMSVRFVTRFSGMIHALHNIREFILGRNLTSVISVARPLLKIQVL
Secondary structure LLLLLLLEEELLLLEEEEEEEHHHHHHHHHHHHHHHHHLLLLLLEEEELLHHHLEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL
PiMo ooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiii