NONHSAT097674
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097674 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
982 nt |
Genomic location |
chr4-:106290722..106320793 |
Exon number |
5 |
Exons |
106290722..106290910,106291994..106292030,106307724..106307793,106317406..106317491,106320194..106320793 |
Genome context |
|
Sequence |
000001 TCCTTCTACC TTTTCCCCTC TTGTCCAGTT AGTGATGTAC TTCTCACTTT TATAATGCTT TCTTTTACTc cctcttctat 000080
000081 gacattacca ttgcttctgt ttatctctgt taaaacctca ttgcatttta attgcagttt atctatttgt ctctttccct 000160 000161 gagttaaaaa ctgagtatct tgatgaaaag aactttgttg tatccatcca tttattcccc atacatagca cattgtctga 000240 000241 agatgctttg taaatgtttg tagagtgcag gaatAGTATT ATACATATGA AAACACAAAA GTCTGAAGGT GATATACATA 000320 000321 TCAATGATGA TGCTGCTCTA GGTATCACAA TCAATTGTGC TTCTGGTTAG ACTGGGCCCC ATGTTTCCTG GCTCCCTCAG 000400 000401 TCCAATGCTC TGCCACTAAA GGGAATTAAT TTTGGTTCTT AACAAAACAT CTTTTTGTTT TTTTCTTTAC AGATATTGAT 000480 000481 GATGTTAAGA AGTTCAAACC GGGTTACCTG GAAGCTACTC TTAATTGGTT TAGATTATAT AAGGTACCAG ATGGAAAACC 000560 000561 AGAAAACCAG TTTGCTTTTA ATGGAGAATT CAAAAACAAG GCTTTTGCTC TTGAAGTTAT TAAATCCACT CATCAATGTT 000640 000641 GGAAAGCATT GCTTATGAAG AAGTGTAATG GAGGAGCTAT AAATTGCACA AACGTGCAGA TATCTGATAG CCCTTTCCGT 000720 000721 TGCACTCAAG AGGAAGCAAG ATCATTAGTT GAATCGGTAT CATCTTCACC AAATAAAGAA AGTAATGAAG AAGAGCAAGT 000800 000801 GTGGCACTTC CTTGGCAAGT GATTGAAACA TCTGAAATTC TGCTGTCAAG ATTCCCATCT CTAAGGACTC CAAGTGCTAG 000880 000881 AGACAAGGGG GTCTATGAGC ATTTACTGAC TTCCTGTTAA AACTTCATTT TTTCAAACTT TTTGAGCTAT GCAATATATA 000960 000961 AATAAACAGT AAGAATTTTA AA |
Predicted Small Protein
Name | NONHSAT097674_smProtein_182:262 |
Length | 27 |
Molecular weight | 3089.8675 |
Aromaticity | 0.115384615385 |
Instability index | 72.0307692308 |
Isoelectric point | 9.30206298828 |
Runs | 5 |
Runs residual | 0.0169946332737 |
Runs probability | 0.0277866101395 |
Amino acid sequence | MKRTLLYPSIYSPYIAHCLKMLCKCL |
Secondary structure | LLEELLLLLLLLHHHHHHHHHHHHHL |
PRMN | - |
PiMo | - |