NONHSAT097214
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT097214 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
2422 nt |
Genomic location |
chr4-:84213615..84216036 |
Exon number |
1 |
Exons |
84213615..84216036 |
Genome context |
|
Sequence |
000001 TTGGCCAAGC TGGTCTCGAA CTCCTGTCCT CGAACTCCTG TCCTCAAGTG ATCCACCCGC CTCAGCCTCT CAAAGTGCTG 000080
000081 GGATTACAGG TGTGAGCCAC CACACCCAGC AGTGTTTTAT TTTTGAGACA GGGTATCATT CTGTTGCCCA GGCTTGAGTG 000160 000161 CAGTGGTGCA ATCATAGATC ACTGCAGCCT TTTAACTCCT GGGCTCAAGT CATCCTCCTG CTTAGCCTCC CAAGTAGCTA 000240 000241 GGACCACAGA CACATGCCAT CACACTTGGC TATTTTTAAA AAATTTTTTG TAGAGATGGG GTCTCGCTAT GTTACCCAAA 000320 000321 CTGGTCCTGA ACTCCTGGAC TCAATTGATC CTCCCACCTT GGCCTTCCAG GTGCTGGGAT TTCTTTGGGA GTACAGCATG 000400 000401 GTACAGCAGG AGATCATTTG ATGTTACCTC TGTGCAGTGT TGCTAGTCAG CGAAAGACTA TAATACCTGT GGGGACAGCG 000480 000481 ATTAGCCACC ACAACCAGTC TTTATTTAAA GTTATTAAAA ATGGCTGGGC GCAGTGGCTC ACACCTGTAA TCCTAGCACT 000560 000561 TTGGGAGGCC GAGGCAGATG GATCACCTGA CGTGAGGAAT TTGATACCAG CCTGGCCAAC ATGGTGAAAC CCCATCTCTA 000640 000641 CTAAAAAATA CAAAAATTAG CTGGGTGTGG TCCTGTAGTC CCAGCTACTT GGGAGGCTGG GGCAGGAGAA TTACTTGAAC 000720 000721 CCAGGAGGCA GAGGTTGCAG TGAGCCGAGA TTGTGCCACT GCACTCCAGC CTGGGTGACA GAGAGAGATT CCATCTCAAA 000800 000801 AAAACAAGTT ATTAAAAATG TATATGAATG CTCCTAATAT GGTCAGGAAG CAAGGAAGCG AAGGATATAT TATGAGTTTT 000880 000881 AAGAAGGTGC TTAGCTGTAT ATTTATCTTT CAAAATGTAT TAGAAGATTT TAGAATTCTT TCCTTCATGT GCCATCTCTA 000960 000961 CAGGCACCCA TCAGAAAAAG CATACTGCCG TTACCGTGAA ACTGGTTGTA AAAGAGAAAC TATCTATTTG CACCTTAAAA 001040 001041 GACAGCTAGA TTTTGCTGAT TTTCTTCTTT CGGTTTTCTT TGTCAGCAAT AATATGTGAG AGGACAGATT GTTAGATATG 001120 001121 ATAGTATAAA AAATGGTTAA TGACAATTCA GAGGCGAGGA GATTCTGTAA ACTTAAAATT ACTATAAATG AAATTGATTT 001200 001201 GTCAAGAGGA TAAATTTTAG AAAACACCCA ATACCTTATA ACTGTCTGTT AATGCTTGCT TTTTCTCTAC CTTTCTTCCT 001280 001281 TGTTTCAGTT GGGAAGCTTT TGGCTGCAAG TAACAGAAAC TCCTAATTCA AATGGCTTAA GCAATAAGGA AATGTATATT 001360 001361 CCCACATAAC TAGACGTTCA AACAGGCCAG GCTCCAGCAC TTCAGTACGT CACCAGGGAT CTGGGTTCTT CCCAGCTCTC 001440 001441 TGCTCTGCCA TCTTTAGCGC TGGCTTCATT CTCAGACTCT GGTAGCATGA TGGCTGTAGC TGTTTCATGG GCCCCTTCAA 001520 001521 ACCTCATAGC AACCAGAGGA AGAAAATGAG CCATTTTTTG AGTCTCCTTC ATAGACTTGA ATAACTCTTT TTCAGAGCTT 001600 001601 CTCACAGCAA ACCTCTCCTC ATGTCTCCTC ATGTCTTATT GTTCAGAAAT GGGTAATGTG GCCATTTCAC CAGTCACTGC 001680 001681 CAACAACAAC GAGGTTCCTA TAATTGTCTC TGAGTAACCC TTTGGAATGG AGAGGGTGTT GGTCAGTCTA CAAACTGAAC 001760 001761 ACTGCAGTTC TGCGCTTTTT ACCAGTGAAA AAATGTAATT ATTTTCCCCT CTTAAGGATT AATATTCTTC AAATGTATGC 001840 001841 CTGTTATGGA TATAGTATCT TTAAAATTTT TTATTTTAAT AGCTTTAGGG GTACACACTT TTTGCTTACA GGGGTGAATT 001920 001921 GTGTAGTGGT GAAGACTCGG CTTTTAATGT ACTTGTCACC TGAGTGATGT ACATTGTACC CAATAGGTAA TTTTTCATCC 002000 002001 ATTACCCTCC TTCCGCCCTC TTCCCTTCTG AGTCTCCAAC ATCCCTTATA CCACTGTGTA TGTTCTTGTG TACCTACAGC 002080 002081 TAAGCTTCCA CTTATAAGTG AGAACATGCA GTATTTGGTT TTCCATTCCT GAGTTACTTC CCTTAGGATA ACAGCCCCCA 002160 002161 GTTCCGTCCA AGTTGCTGCA AAATACATTA TTCTTCTTTA TGGCTGAGTA ATAGTCCATG GTACATATAT ACCACATTTT 002240 002241 CTTTATCCAC TTATCAGTTG ATGGACACTT AGGTTAATTC CATTCAATTT CATTCAATTT AAGTATATTT GTAAGGAGCT 002320 002321 AAAGCTGAAA ATTAAATTTT AGATCTTTCA ATACTCTTAA ATTTTATATG TAAGTGGTTT TTATATTTTC ACATTTGAAA 002400 002401 TAAAGTAATT TTTATAATCT TG |
Predicted Small Protein
Name | NONHSAT097214_smProtein_308:445 |
Length | 46 |
Molecular weight | 5324.1435 |
Aromaticity | 0.177777777778 |
Instability index | 57.4555555556 |
Isoelectric point | 8.65509033203 |
Runs | 8 |
Runs residual | 0.0155303030303 |
Runs probability | 0.00500132485428 |
Amino acid sequence | MLPKLVLNSWTQLILPPWPSRCWDFFGSTAWYSRRSFDVTSVQCC |
Secondary structure | LLLHHHLLLHHHEELLLLLLLLLLLLLLEEEEEEEEEEEEEEEEL |
PRMN | - |
PiMo | - |