NONHSAT097048

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT097048

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2051 nt

Genomic location

chr4+:78078378..78354542

Exon number

12

Exons

78078378..78078659,78079686..78079823,78080520..78080657,78081874..78082124,78082633..78082711,78082802..78082900,78085427..78085632,78100109..78100219,78106250..78106563,78113364..78113420,78353394..78353587,78354361..78354542

Genome context

Sequence
000001 GGGCTCGGGG AGGTTTCCGC TGAGGCGGCG GGGGTGCGGC GGTGGGCTGG TCTTCCGCGG CCGGCGTTGC GCCGCGGCGG 000080
000081 AGGGTGGGCG CGCGGGGAGC GGGATGGAGC CGGGGCTGTG AGGCCGAGGC GGCGGTGCCT GGGAGGAAGG GTCGGATGCC 000160
000161 GGACCGGGGG CACCGCTGAG GCGGTGGGTC CCCGACCTGC GAGACAGGTT TGGAAGCCCC CGCTGCGCCC AGTCCGTGCG 000240
000241 GACCGCGAGG CCGCGGGCGG GTGGAGGCGC GTCTCCGGCA CGATGAAGGA TTTGGGGGCA GAGCACTTGG CAGGTCATGA 000320
000321 AGGGGTCCAA CTTCTCGGGT TGTTGAACGT CTACCTGGAA CAAGAAGAGA GATTCCAACC TCGAGAAAAA GGGCTGAGTT 000400
000401 TGATTGAGGC TACCCCGGAG AATGATAACA CTTTGTGTCC AGGATTGAGA AATGCCAAAG TTGAAGATTT AAGGAGTTTA 000480
000481 GCCAACTTTT TTGGATCTTG CACTGAAACT TTTGTCCTGG CTGTCAATAT TTTGGACAGG TTCTTGGCTC TTATGAAGGT 000560
000561 GAAACCTAAA CATTTGTCTT GCATTGGAGT CTGTTCTTTT TTGCTGGCTG CTAGAATAGT TGAAGAAGAC TGCAATATTC 000640
000641 CATCCACTCA TGATGTGATC CGGATTAGTC AGTGTAAATG TACTGCTTCT GACATAAAAC GGATGGAAAA AATAATTTCA 000720
000721 GAAAAATTGC ACTATGAATT GGAAGCTACT ACTGCCTTAA ACTTTTTGCA CTTATACCAT ACTATTATAC TTTGTCATAC 000800
000801 TTCAGAAAGG AAAGAAATAC TGAGCCTTGA TAAACTAGAA GCTCAGCTGA AAGCTTGCAA CTGCCGACTC ATCTTTTCAA 000880
000881 AAGCAAAACC ATCTGTATTA GCCTTGTGCC TTCTCAATTT GGAAGTGGAA ACTTTGAAAT CTGTTGAATT ACTGGAAATT 000960
000961 CTCTTGCTAG TTAAAAAACA TTCCAAGATT AATGACACTG AGTTCTTCTA CTGGAGAGAG TTGGTTTCTA AATGCCTAGC 001040
001041 CGAGTATTCT TCTCCTGAAT GTTGCAAACC AGATCTTAAG AAGTTGGTTT GGATCGTTTC AAGGCGCACA GCCCAGAACC 001120
001121 TCCACAACAG CTACTATAGT GTTCCTGAGC TGCCAACGAT ACCTGAGGGG GGTTGTTTTG ATGAAAGTGA AAGctctgtt 001200
001201 gcccaggctg gagtgcagtg gcccgatctc agctcattcc aacctccacc taccaggttc aagcgattct catgcctcag 001280
001281 cctccggagt agctgggatt acagCTCCTG GACCTGAAGC AGACCTGCAG AGAGGATCAA GTGCAGAGAC AAGCTGCTGC 001360
001361 TGAGATCATC ATAGGGGACC TCTTCTAACA TATGAGTTCC TGAGGAAGTG CTGTGACCTT CCAATGCTGC CACTGGTAGT 001440
001441 CTCATTTCAA AGAGTAAAAT GTGAAAATCC AATGGCAGCA GCTATTGTGA TATGCCAGAC AGCAGGAATT GGGACTAAAA 001520
001521 ATCAAGGGAT ACTTGTGATA ATAGATCCAT AGTACTTTGG AGCTGGAAGA AACCCAGCTT CAAAAAACAG CTTGATTTGC 001600
001601 AGCTCTTCAT TCAAAAAGaa tcccatccag ggtatgacat tgaacttact catcacgtct ctatagtgtc ttctggagtt 001680
001681 tggaactaag acccctagac agcagagcct aagggaggaa tgactctacc aggagacaaa ataatgactc tgttaaagtt 001760
001761 gagatggccg gctgcctcat acctctgatt caaaagtaaa ggagttgctg tactggttag ggcgattgtt cctgacaacc 001840
001841 aaggggaaac tggactgcta cacaaggagg actgaacaga gctgaggctt ccctaatgaa gacattctgc tgtggtcaga 001920
001921 agtttcagca gcccctgagt tcctgcctgt tcctcctgaa agccttccct atctgtggat aatgggcttg ccttgccaac 002000
002001 ttccacaatt gcataaaaca agtccttgca atgaatctca acatgtatta a
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Predicted Small Protein

Name NONHSAT097048_smProtein_1895:1981
Length 29
Molecular weight 3139.84
Aromaticity 0.142857142857
Instability index 57.0535714286
Isoelectric point 8.90753173828
Runs 5
Runs residual 0.0246478873239
Runs probability 0.0482070305601
Amino acid sequence MKTFCCGQKFQQPLSSCLFLLKAFPICG
Secondary structure LLEEELLLLLLLLHHHHHHHHHHLLLLL
PRMN -
PiMo -