NONHSAT095926
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT095926 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1815 nt |
Genomic location |
chr4-:29467323..29469472 |
Exon number |
2 |
Exons |
29467323..29468189,29468525..29469472 |
Genome context |
|
Sequence |
000001 CTTGCTGAAT TAGAAGAGGG GAGAGATACA GAGTTTCTAA CTGTTGCATT TTTGAGCTTC ACAAATGATT AGGGATTACT 000080
000081 AGGCAAAGTG GAAGTGTGCA CAAGCTAAAC CTACAGATGA GGATGCTGCA TTTATTAAAG AATGGTGGTT TGGATTAAAA 000160 000161 TAAGATAATT GAATAAACAC AGATACCCAC AAACTGTTGA AGGACTTTCT GATATATCCA CAATAAAAGC ATTGGTTTCA 000240 000241 ATTTGGACAA TGACTCATTG CCTGTAAACC CTGGTTAGTT GAGGCTGATG TCCTTGGATC TCACATCACT TTGCAGATGA 000320 000321 GTCTGTGCAG CTTCAAAATA CAAAGCCAGA ATTTGAGACA CAGCAGACAC TCTCCCCAGC TCCTCCTGTC TGCCCTGTTG 000400 000401 TGAAGTTGAA AAGCTTCTGC TTTTTATGAC ATTATTCCTG TTCTCATTCA GTCCTTCAGT TTATTTCAGA GCAGTATTCA 000480 000481 ACTATTTCAA TAGAAATGTT TGTGTATTTT TGTTTTATTT CTTTTGCTTA TCTCTGACTC CTCAACCAGT TAGAGAGATA 000560 000561 TTTATTTCCT GGAAGAGATT ACAGAGTCCA AGTTCACTGA CAGTGCTTAG CAAAGACAAG CTGCCCTCAA GGAGATAATA 000640 000641 CCCTAACAAT TGGAAAACAG AAGCTGTTTC TTTTGCCTGG TTATGCAACA CTATCTTACG TTTCAAACAG AAGAACCTTG 000720 000721 GATGTCCTTG ATTAGTACAT GATTAGTTAG TTTATCTTCA ATACTGTTAA AGCAGATGCT TATTACCTGG GCAACAGAAA 000800 000801 CTGTAAAGAC TTACTCCACG TATTTAATCT TATATCACAG CGCATGTCAG CTCTTTGTCA GAGAGACTGA AAATGAAATG 000880 000881 CTATGAGAAA Ttgttatgga ttaacttgtg ttcccctaaa atgcatagat tgaagtccta acttccaaTG CTGTTATAGT 000960 000961 CTTTGAGTAT CCTTGATGTG CCTTTTAGGA AAAATGAGAC TGACAGTTCC ATACCATGCT GTGGTCTGCA CACATGTGCA 001040 001041 TTGTTTTGAT ATTTCTGTTC CTCTACAAAT GAATAAGAAG CCTACCTGAA ATCATGCTGC TTTGTCTTTA ATACTAGACT 001120 001121 GGATTTTTGT GGAGATTCCC AATTACTTTT CTGATGTTGA TAAGATTAAA TGCCACAATG TCTATCTGTA TATCCAGAGA 001200 001201 GACTAAGAAC TGAAGCTACG AATGTAGCCA GTCAACAGTA CATAATTATT GAAAGCCTAA GTCTTCTTAG CCTTATTCAT 001280 001281 GATCAGTGAA GCAAAGAAGG AGAAAGTGGA TATTATTGGC CTAACTTTAG AATACGCTTC TGGTGGAGAA ACAAAGACTC 001360 001361 TTCTAACAAA AGAAGTACAT ATTGATGCAG GAAGTACAAA GCAGTTCAAC CAAAAGGGTT TTTTTTTTTG GGGGGGACGG 001440 001441 TGTTTATTTT TGGTACCTAT CACCTTCTCT AGGGATTTCC ACTGTGGCTC CATTTATCTT GCTGCTGTGT TCTAGCTTTA 001520 001521 TTGAGAGATT TCTTCACACT ATTTCATTAT ACTCCAATGC CACTCATGAC CTTAGATTGC TCAGCTTGAG ATTTTCCTTT 001600 001601 CCTTAATTCT CCTTGAAACC TAGTAATATT GTGTAATGGT TTTGGAAGTC TCATCTTGCC CTAAGGAGCA ACCAGTTATG 001680 001681 TCTATCAGAA CTGAAAGTAC CCACATAGCA TTTTGCCTGT TAGTTCATCC TACAGAGAAG TGAGACAGGA GTAATAGCCA 001760 001761 ACAAAAGAAG GGACATCTCA ATATCATCTT AATGGACTTA AGGAGGATTG ACTAA |
Predicted Small Protein
Name | NONHSAT095926_smProtein_425:637 |
Length | 71 |
Molecular weight | 8384.7953 |
Aromaticity | 0.214285714286 |
Instability index | 77.8801428571 |
Isoelectric point | 10.2948608398 |
Runs | 12 |
Runs residual | 0.0265912305516 |
Runs probability | 0.0599643761409 |
Amino acid sequence | MTLFLFSFSPSVYFRAVFNYFNRNVCVFLFYFFCLSLTPQPVREIFISWKRLQSPSSLTV LSKDKLPSRR |
Secondary structure | LEEEEEELLLLLEEEHHHHHHLLLEEEEEEEEEEELLLLLLHHHHHHHHHHLLLLLLLEE EELLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLL |
PiMo | ooooooooooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiii iiiiiiiiii |