NONHSAT095799
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095799 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
8544 nt |
Genomic location |
chr4-:24427776..24526490 |
Exon number |
14 |
Exons |
24427776..24428100,24432386..24432744,24433936..24434115,24441116..24441587,24458740..24459285,24470663..24470977,24473998..24474240,24474629..24474680,24509476..24509998,24516847..24517319,24519408..24519908,24520206..24522884,24523100..24524212,24525720..24526490 |
Genome context |
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Sequence |
000001 TTCTGTTACT ACAATTTCAG ATTACATTAA CCTTTCAAGC AACCACAGCA TACTTTTGTT TCATATTAAT CTTAGTATAA 000080
000081 ATTTAAGGCA CGTAATTATT ACTTGAGAAT GTTAATCTCT GTGGCTCAGG GCTGAGAAGG GACCTTCACA GACCTTGGGT 000160 000161 CGTGTTAATC TTCGGAGACT TCACCCCACA TGTTCAAATA TATCCATAGC TCACATGTTC AAATATGTCC ATAGCTCATT 000240 000241 AATGACATTT AAAAAAATTA AAGGCAGGAT AGGAATATCT TAATTTTAAA TGTTTTCTAA CAGTCTCAGA ATTCTTCTAG 000320 000321 TATGAAACCA CATTATTTCA AACGCAGTTT TTATCAATGT TACATTTAAA AATGAAGTTG ACAGATTTTA GTAAATGATT 000400 000401 GCATGTAAAC ATTAATTTGA ATTTTGCAGT TTCTTTAATA TTAGAGAACA TGATGAGGTG GTTTTCTGGT CTTGTGCATT 000480 000481 TTTAGTGGTC CCTAAAAAAT GGGCTATAAG GATTTCTTAG ATGATTAACA GCATTTCAGA GCACGAGTCA TGGTTCAGAG 000560 000561 ACAGTTTTTA AAGTTCTGCT TTATTGAGGT ATAATTAACA TCAACTATAT AGTTTGATAA AGTTTGACAA ATGTATACAG 000640 000641 TTGTGTAATT GTCACCACAA TCAATACGCA ACGTTTTCAT CACCCTAAAA AGTTCCCCAT GTCTCTCTGT AGCTAATACC 000720 000721 CTTCCTCCTA TTCCAAGTGT TTGGCTACTT GGAATCATAC TGTGCGTAGT GGAAAAAAAT GGTGAAGATT AAAAAGCACA 000800 000801 GAACCTTTAA TAAGAGAAGG GGAGGGGCGA AGGAGCAGCC AGAAAGTAAA ATAATTTATT TAGATAGTGG AGTTTCATGC 000880 000881 TTCAGAGAGG TGTGTAGTGG AAGGGAATTG TGAATCCTGA AAGCTATGGG AATTGGTAAT TTAGTCTTTA GCCAGCTTAT 000960 000961 GTAAGTTTAA GGTAGAGGAT ACAAGCAGGT AGTCAAAAGG GCCCAGATGC AGCCTGCCCT GATGTGATCC TCATGAAGTG 001040 001041 TTTCAAAGAA ATAGAGCACC TTTCTGTAAA AATAGATCCA CGTAAAGTTT TCAAAATATT CCTGAGTCTG GCAAGGGTGG 001120 001121 GCCTACCTGA AGTTTCTCCT GACACACTGT TAATTAGCTG CTTTGTAGGT AGGCATGTAT TCTTCAGTTT GCCAGAACCC 001200 001201 CTTGCATGCC TTCATTTAGT CTACCTGTAG GCATTGTTGG GTGAGAAAGG GTTTTGAAGT GGGAAAGCTT GCAAAGACTG 001280 001281 CTTTTAACGG AAAGTTTCAT GGGCAGGATT GAGACCAAGA GGAAAGAAAC TTCAAGTTAA TGGACTACCT TGAAATTTTA 001360 001361 GGCAAAACCT GTACCTGTGT CATGGGAGAG ACTGGGATTA TGGCCACACT TGATCTGAAG TTGAGGTCAA ACTTGGTGAT 001440 001441 GTTGCCTTGA AAATAGAGAT TTTCATAGAC CAGGACGAAG ATAGAAGGGA AAGTTACAAG GGACTTCAGC TTAAATTTAG 001520 001521 TCTCTCTTAT CTTGGCACAG AGGGATGTAT CTGTTAATCT GAGGTGGATC AAGTTCAGGC TTGAGAGAGG GAGTAATGCA 001600 001601 TGAGACTTTG AAAGTAGTTT GATTGTGAGT AAGCAAGAGA TGGTGAAAGA GATGCCTTAG ATCATGGGCA TACTTAGATC 001680 001681 TTACAATTTT GATGATGAAT TCACGCTAGC CTGAGAACTG AAGTGGAAGG CTACCCCTGG TTGATGATGG GTAGCAGGGA 001760 001761 TGTAGAAAAG TGCTAAAGTC TTTAAGATCT TGCCCTTTAA AAGAATCATC AGGTGGGGCA GATGATTAAA GATCATTACT 001840 001841 TAGGGTTTAA TGCGTTCAGT GTGTTTAGAT TTGCGTGGCA GTTATTAAAA TAAGGCATGC TATCAGTTTG AGGGACTGAG 001920 001921 TTACTTAAAA CCATGAATAG ATAGAAATTC ATTCTAATGA TTACACAGGT GTGTGTTTTT TATTTTAGAT TATATTAAAA 002000 002001 AGTACAGTTG CTAAGATGCT GGGAAATATT TCAACTGTGG CACTAGCACT GTTAGCTTTA GCAGAGAAGC TAGTTTTTTT 002080 002081 TTTTTTTTTT TTTTTTTAAT AGGAGACAGG GTCTCACTCT GTCTCTCAGG CTAGAGTGCA GTGGTGCCAT CTCGGCTCAC 002160 002161 TGCAGCCTCT GCCTCACAGG TTCAAGCGAG TCTCATGCCT CAGCCTACCG AGTAATTGGG ATTACAGGCA CCCGCCACCA 002240 002241 CGCCCAGCTA ATTTTTGTAT TTTTAGTAGA GATGGGGTTT CACCATGTTG GTCAGGTTGG TCTTGAACTC CTAACCTCAA 002320 002321 GTGGTCTGCC CTCCTCAGCC ACCTTAAGTG TTGGGATTAC AGGCGTGAGC CACCATGCCC AGCTGGTATT GAGTTCTTAA 002400 002401 GAAGGGAAAT ACATTGATTT TTAAGGAAGA TAGATAAAAC TTGTGCAGTA GATTATAAAA GAAATGATTA GAATTTCATC 002480 002481 TCTGACTGAT TTGTGATAAC GAGTATGTTA TTATTTTAGA TTATTTGCTT TTTAGTGTAC TGTCTCAGTT CTGCTTACAC 002560 002561 AAAAACATGC TGAAGACTTT TTTGTAAGAT ATTTACTTAA AAAATTTTAA AGTTTTATAT TTGGGTGTTT TGTTGAATCA 002640 002641 CTGTTTCCCA AGATTATATT AATGAAATAC AGCTTACAAC TCATTTTCTT TTTTCTTATT ATTTCCCTTT TTACACTTAA 002720 002721 GGAGGGCTGA ATGGATAACT TTTAAGGTAT TGTCTTAAGT GTTAAATGTC TGAGTATGCT TTCCTTGCCT CTCCAGAAAT 002800 002801 ATTTTAATAA CCTTAGAGAA ACATGTAGGA TTTTCTACAA AAAGTGTCGG CTGCTTTAGC GGTTTCTCCC TGAAGTGATG 002880 002881 TGTAACTGAT CAGGATCTAC TCATGTCGTC TTTGGTAAAG TTATGTCGCT TGTCAGGGTG AGGAGAGTTT TTGAGATGCA 002960 002961 AATTTTCCCG TTTTTGTTTT ATTACCATGG AGAAATGTAA TAGTTGGTGT CTTTTGGTAT AGCTAACTTT TAAACAGTAC 003040 003041 AGGTGGCTCT TGGACAGTCA CTGTTTTAAA CAAGCAGCAG TAAGGCAGAC TGAAGACAGT AGGAAAAATG ATCAACATGG 003120 003121 TGGAAGGAAA GAAAGCAGTC AGTAACAACT TATATAATAA TTTGCAGGAA CTCTTAGAAC TGAACCTTAC AGTTAAGTTG 003200 003201 TGATATCTGG GGTAGATTGT ATTATTTCCT TATTTCAGAA GAACTGAGGC CCCAGGTCAC ATGGCTGTTT ATCTGCAGAG 003280 003281 CTGGCATTCC ACTCTGCTTA GCTAAGTGCT CCCTCAACCT TGATGCTATT TTTCCTGAGC TGGGTGCCAG GGGAGCTTGG 003360 003361 ATATGTAAAG CTTGGTTGAT GTCCTTGATA GGTGCATGGT TCTAAGATTG TGATTTTCAT CCTAAGTTTA GGAAGTTACA 003440 003441 CACCTGCGTG GACAAGGTGG GTCTAATTAT TTTTCATTCT GGTTTAATGT TGACAAGAAA ACAGACATGG AAGAGGACTT 003520 003521 TCCTGCACTC CTGGTCTTCC TTTTCCTTAA GTAGTGCTAC AAGGGTCTGA CCGGAAGATC TTTTTACTGG TGGCTTGCTG 003600 003601 CTTAATATAA TACAGGTTTT GAGTACAATC ATTTCTTCGT ATTGTTTTTA AAGAGCAATG ATATGACTAG TCTGAAGTGA 003680 003681 ACATAGTCTA GTCACTTGCT TGGTTTGGGG ATTAGAAGTA TTTGCAAGGT GAACCACCCA TTCTCTTCTG CTTATTTACA 003760 003761 CTACACTGCT TTTATCCATA ACTTGGAGCC ATCATTAAGA TAGACTGTTT TTTCTATCTC TGTCCTTGGA ACCTGTTCAG 003840 003841 GTATTTAAAG CTGTTTTCCT CTGCTAGGCT TTGAGTTTCT TAAGGGTTGG AGCCATATCA TTATGTCCCT TGCACCTGGT 003920 003921 TGTGGTATAC AATATCATTC TTTCAGCAAA TACTTTTATT TATTTATTTA TTTGAGGCAG AATCTCGCTC TGTTGCTCAG 004000 004001 GCTGGAGTGC AGTGGCACGA TCTGGCTCAC TGCAACCTCT GCCTCCCAGG TACAAGTGTT TCTCCTGTCT CAGCCTCCCG 004080 004081 AGTAGCTGGG ATTACAGGCG CCCACCATCA CATCCGGCTA ATTTTTGTAT TTTTAGTGGA GATGGGGTTT CGCCATGTTG 004160 004161 GCCAGGCTTG TCTTGAACTC CTGACCTCAA GTGATCCACC CACCTCGGCC TCCCAAAGTG CTGGGATTAC AGGCGTGAGC 004240 004241 CACCGCGCCC GGCCAAGCTT CTTTCTTTAT ATGGACTTTG AAACATTTAC TGTGACTCTT GGGATTTCTA GTTGAAGTCA 004320 004321 CCTGCAAAGG GATTCCCCCT GTAAATGTCC ATATTGCATA TTGCTGTGAA TATGACTGGA GGTTGTAACT TACCTGAATG 004400 004401 TTTCCCTTTC CTGATTACAT GCCAGGTAAT ACTGAAAGGG AAATGTCCAG AAAGGTTGTA TTGGATGCTT TCAGAAGAAT 004480 004481 CACAACCTTT TCATGAATAA ACCTCCTTTA TTTATGAATG GACATTGTGC GGTCTGTGAC AATGTTTATA AGTGCTTTTA 004560 004561 GAAATCATTT TCATTGTAAA AAGTATATTA GATGTCTTTT GCCAAATTTT ATCTAGTTAG TAATTATAAA CAGTATCAGT 004640 004641 CTTATTTTCC TATTGTTTAT GAACAATATA AAGACCTCTT AATAGTGATC TAAAAGTTTT CTATTGTCAC TGGGTTACCT 004720 004721 TCAGAATTTC TAGGCCTGTT AGATTTATTT TTGTCGTTAG CATTTAAAGT TTTGCTCTGT ATTAGAAAAT AGAAAACTTA 004800 004801 GAAAAACAGG TAGTGGCAGT TCATCACTTC CCCCACTTTT ATTTCCAAGT CATTATCTAG TTTCTCAATG TGGCATTGCA 004880 004881 ACTCTGATTT TTTACTGTTC GTGCACTAAA GCATTTGAGA TAAGCCCTTA GTGTTGAGGA AATCCTAAAT CCTACTGCTG 004960 004961 GGGGGTTAAA AGAAATATAG TGACAGGCTA TGAAATAGTG TTGTCATAAC TTATCAGTGG CTAGTAAATA GGGTAGTTGC 005040 005041 CTTCTGACAC CATTTTGCGG TGGCTCACGC CTGTAATCCC AGCACTTTGG GAGGCCGAGG CAGGCGGATC ACGAGGTCAG 005120 005121 GAGATCGAGA CCATCCTGGC AAACACGGTG AAACCCCGTC TCTACTAAAA ATACAAAAAA AAAAAAAAAT TAGCCGGGCG 005200 005201 CGGTGGCCGG CGCCTGTAGT CTCAGCTACT CGCGAGGCTG AGGCAGGAGA ATGGCGTGAA CCCGGGAGGC GGAGCTTGCA 005280 005281 GTGAGCCGAG ATCGTGCCAC TGCACTCCAG CCTGGGCGAC AGAGCGAGAC TCCGTCTCAA AAAAAAAAAA AAAAAAAAAA 005360 005361 AAAAAGTATT TATTCCCTAA GCATATTCAT TATATGCATT TCTAGGTATT TTGTTGCAGG GACGCTTTCA GATTATCTGT 005440 005441 CTTCAGAATT GCTAGATACA GAAGTTGACC ACTCCCTTTT AATCTTTAAA TCAAGGACAG GATTGAGGTC AATATCGCTG 005520 005521 TGTGCTGTCT TTGTCAACAA GAAATCGGCA TTTATTTTGC ACTGCAAATG AGAAAAACAA AAGTGCCTGG TCCTAGGCCA 005600 005601 ACAGCTTTTT TAAAACCATA ATTGTAGGGA TTTGAGCTAC TGTGCTGGGC CGAGGGCAAA GGTGAACCCG ATGGCTCTGA 005680 005681 GCGAATGGCT CACCTGGGCT TCCCAGGAGG AGCAGAGTCA TTTGGGGGCA GCACTGAAAC CTAATTCACC AACTGAGGTC 005760 005761 AGCAGAGCTG GGAATGAGTT GGGCGATTCT CTGGATTCAC TCCTTGCCTT TGGAGCATGA CTGTTGAAAC ATTCCTGGGC 005840 005841 TCCAGGGTTA AAAAAAAAAA AAGTCCCCAC TCCTGGGTGT TCCCTCTCCA TTCCCCTGCC TGGCCCCAAA CTCCCCAGGC 005920 005921 TGAGACTTGA TGGGTTTTGG GGATACTGCT GTGGATGGAG AAATCCTTGC TCTCTTGGCT CCATGCAGAG GCCTTCCGGC 006000 006001 AATTGGTGAC AGTTGCACCC ACTGTGTGGC TAACACTTCA GCCTGGCTGC CTGTCCCCGG CAGCCGGCGG AGTCAGCGCG 006080 006081 CCCACGTGAC GGCCCCGGCT CTCCGTTCCG TTCCCTTTGC CATTCCCTTC CCCCTCCTTT TCTTTTATTT TCGAGAGAAT 006160 006161 TTCTTCTTGG CTTATTGGTT TAATTTGATT TTTAAAATTT TGGGTTGCTT TTGTGTATGT GTGCTTTTTT TTTCTTTCCT 006240 006241 CATTTTATTT GCATCCAGAG CATGGCGGGC TGCGGGCTGT CGGAAGACAC CCTCTTCTCT TCCTTCTTTT ACAACTACGG 006320 006321 CTCCTCCTGG GAAACCCCTT CCAACCAGAG AGATGAAGAA TACATGTGCA TAACGGGCCT TACTGATCTC CAGTTTGCAT 006400 006401 TTTCAGCATT TGAGCATGGG CACATGTTTG AGAAACCTGC TCCTAACTGT TCCTAAGAAG AAAAAGAATA CAACAAAGGC 006480 006481 GATACTTTAA ATCTCATCTT GGACTCGGGC AGAGCTGCTA TAGGAAGGCC TGGGCCAAAT TTGCAAGAGT GAGACTTGTT 006560 006561 CATGATTTTA CCCTGATTGC TGCCAAAATG CTTACATATC CTGCGTTTCC TAAAAATGGC AATGTTCTTC AGATATAATT 006640 006641 TGTTTACTCT ACCTCAATTA AAATGAGGCA GGAGAATGGC GTGAACCTGG GAGCGGAGGT TGCAGTGACC CGAGTTTGCG 006720 006721 CCACTGCACT CTAGCCTGGG GGACAGAGCA AGACTCCATC TTAAAACAAA CAAACAAACA AACAAACAAA CAAACAAAAA 006800 006801 ACAGTATCTT TTGTTATTCC TGAGATAATT CCAAGAGAAG AGGAATGTTG ACTATATCCT ATGGCATCAT TATTGTTTGT 006880 006881 CTGATTGGAC CCAGGCTAGA AATCTTAAAG ATATTTGTGA AAAATAAAGC TCATATTCAA GATGAAACAT TAAACCCCAC 006960 006961 AGTGAAGGTC ATTCTCATTC TCTCTGGCTT GCCCCTCTTT CTTTCTCACT TGACTTTCTC ATAATTTTTT TCAACAACGT 007040 007041 CTTTGGACCC CGGTTCATTA AACTCTCCCT CCCCACATCT GATTTTTCCC CAAGAAAGTG CATTCTGGAG AGGGCAGGGG 007120 007121 GAGTGACTAT TCATTTGTCT ACACTTCCCA GGCTCAAAGG AGCTGTGGTC ACTATTGCTT CCAAAACATT CCTTTGCCAT 007200 007201 AATCCTGCAT TAGAGCAAAG CACTGAATTG GCTTCTCTTT TGGAAGAATT CCTTTTGGAG AAAAAGTCTC CTTCTTGGAC 007280 007281 CTTAAGGGAT TTGGCTCTGA GGGTTGAGTC ATGTTCCCAT GAATGCACAG TAAAATCATG GTAAATCCAA GCCTAGAACC 007360 007361 CCAGAGCCTA TTTGTATAAC CATCAACTGG TCATTTTATC AGGATTTATC TTGGATTTTT GATGTGCAAA GATCAGAGTG 007440 007441 GTTATAACAG AAGTCTCTAC AGAGCTACCG CAGAATCCCT ATGCCTACTG TTGAGACGCT TTCTAATGCT GTCTTGGAAT 007520 007521 TCTTCCCGTT TCTTCTGGAA ATCTTTTTTT CACGTGAAAG CAGTTGCTGG TAGTACCCAG ATGGTGGCCA TATAGTCCCT 007600 007601 AGGTATGACA GTCTGCCCAA TACCAGTTAA ACATTATAAA TAGTCAGTGG GTACTCCTTG AATGACTTTT AACCTTGAAC 007680 007681 CACCATATGA AGTCAGTCTA TCTGATTTGC GCTAAGTCTT TGGTGCTTCA TGAAATCCCT CTGCTCTCCT CGGTTAGCTA 007760 007761 CCTTCCAATC CCTGATGGCA GCACATCCAA AATGAGCTCT CCCTCACCCT GTGCAGGTTG TGCAGAAAAT CTTCCCTCAT 007840 007841 CTTTCACAGA GAGAGAAAAA AATGGAGTCT TGCTCTGTCT CCCAGGCTGG AGTGCAGCGG TGTGATCTCA GCTTACCACA 007920 007921 ACCTCCACCT CCCGGGTTCA AGTGATTCTC CCACGTCAAC CTCCCGAGTA GCTGGGATTA CCAGGCACCC GCCACCACAC 008000 008001 CTGGCTACTT TTTTGGTATT TTTTTTTAGT AGAGAAAGGG TTTCACCATG TTGGTCAGGC TGGTCTTGAA CTCCTGACCT 008080 008081 CAGGCGATCC GCTGCCTCAG CCTCCCAGAG TGCTGGGATG ACAGGCTTGA GCCCCCGCGC CCGGCCCCTA CTTTCTGTCT 008160 008161 CAGGGTCTGT GCCTTACTTC AGACTCATAC CATGTCTCTT CTGGACTCTT GCCTTGTAGT GAAATTCTCA GTAATTTCAC 008240 008241 TGGGTTTTGT TTTGGGAAGA AGCTGGTATA TCGCTGCTGT TTTTGTTCGT ATGCTGTCAA GGAGATTGAA GTTTATTTGA 008320 008321 AATGTTCCTT TTATTTTTAA ATGGCACTTG GGACTTTTCA TCCTTAGAAG CCCTGTTTTT CTTCCCCTTT AAATTAGGGA 008400 008401 CTAAGGTTAG AGGAGGAGTT GGATTTATTT TCTGACACTT TCTGAATAAT TAGTTATTAT GTCTCAGAAA GAATCACAAT 008480 008481 ATCAATAGTA TATGTTCTGG AATTACGAAG TATTATATTA GAGGGCTTTA CCTCTCTACC TTCT |
Predicted Small Protein
Name | NONHSAT095799_smProtein_3902:4084 |
Length | 61 |
Molecular weight | 6815.8869 |
Aromaticity | 0.15 |
Instability index | 56.0035 |
Isoelectric point | 7.80523681641 |
Runs | 9 |
Runs residual | 0.000265957446809 |
Runs probability | 0.0474788514004 |
Amino acid sequence | MSLAPGCGIQYHSFSKYFYLFIYLRQNLALLLRLECSGTIWLTATSASQVQVFLLSQPPE |
Secondary structure | LLLLLLLLEEELLLHHHHHHHHHHHHHHHHHHHHHLLLEEEEEELLLLLEEEEEEELLLL |
PRMN | - |
PiMo | - |