NONHSAT095025

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT095025

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1590 nt

Genomic location

chr4-:6909871..6911439

Exon number

1

Exons

6909871..6911439

Genome context

Sequence
000001 GCGGGCCCGT TCTTCCGCCC GTGCCGCCGC GTCTGGAGCT CGGCGCTCGC CCGGCTGTCC CTCTTCCGGG GGCCGCCCGC 000080
000081 CGCGGGCCTC CGGAGCGGCG TCGCCGGCCC TTTTTTTTTG CCGGAGAACC AACCGGAGTG GCGAGGAGCT GCCTTGAGCG 000160
000161 GGCCTTTGTG CCCGCAGGGC CCCCACGGAC ATCCGACAGG GGGCCCCCTA CCTGGTCGGC TCCACCCGCA GCCATCTTGG 000240
000241 AAGTGGGAAG CGGCCGGGAG GGGGAAGGGG CTCGAGCGGG CAGGGCTCAG GCGTAGGGAG CCGAGCGGCG GAGCGCATCG 000320
000321 ATGGGGCTCC CCTGCCCCGG CCGGTGTGCG GGAGACGGCC CGGGCCCCGC CGCGGAAGGG AAGCTTTGCG TGACACCGGA 000400
000401 GCTCAGGCCC CGCCGCGGTG GTCTTGGGAG CGGCGCCGTG GCGTCCTCCC AGCCAGCCTC AGTCTCTTAA TCTATAAAGG 000480
000481 GCTTTTCGGA ACGTTCTCTC TTATCGCGCT GTGACACGGT GCCTGGCGCT GTAGTTCCCA AACTGGTCTG CACTTTAGTA 000560
000561 TTGCCTGCGG AGCTTTTAAT ATTCTGAAGC CCAGGCCGAT TAAGTCACAG TCTCTGAAGA TGAGATGGAA GCATCATCAG 000640
000641 TTTGGGAAGC TGTGTAATGT GCACGCGGGT TTGGAAGCCA CTGGCCTGGC GTTATCTGCA TATTTGGCCT CAACATTGCA 000720
000721 CAAACTCCAG AGACGGGATC TATGATCAGA GCCATTGTAC AAAGCGGGAA ACGGGCTCAG AGATGAAGCC CTCCGCCCAA 000800
000801 GGACCCGGGT GGGTCAGTAG CTGAGAGGGG CAGAAGCCAG GTTCCCTGCA CCAGAGCCCT CCATGAGCTG GTAGAGAGTA 000880
000881 TGTGAGGAGC CCCTGTTGAC GGGCAGTGGG TCTCCATTCC CCTTCTAGGC TGTGGGTTCC ATGAGGAAAG CCGGGCTTAT 000960
000961 CTTGTTTACT GCTATTTTCC CTGGGCCTGG CAAATAGTTG GTATTTGACG TTATTGGGTT GTCGTTAGAC TCTGGGGACT 001040
001041 TGAGGGCAAG AGGAGAGACC CAGCGCTGGG AGCCAGAAGT CCTGGATTTC CACTTGGCTT TGGCTCCTCC CAACCAGGAG 001120
001121 CCCTGAGGGT TGTCACTGGC AGATAAATTA CCAGAGAGGA AACCCGGGAG AGACTGACTG CAGCCCAATC TAAGGGAAGA 001200
001201 CTCAGCCACT CAGAAAGGTC AGGGGCAGGA GGAGTTTCCG CATTACAGGA AGCATCTGGA AGCATGAAAT GGAAGATTTG 001280
001281 TCTCTACTGC GGTCGTTAGG GATGGGCTAG GGAACCCCGA ACTTGGGTCT CCTCTCCAGC TCATGGCTGT AAAAACCCTG 001360
001361 AGCATCTATG AGATATGACG CAGAAGCAAG AGAGATTTTT AAAGGCGATC TCTTGAAAGC AAAAACATTA ACATCCCTCG 001440
001441 CAGTGCTGCA TCACAGAAAC TTTATAAATG CTTAAATTTC TGGGGGTTTT AAGTAAAAAT AATACGAGGC CTCCTTCATA 001520
001521 CCTCTTAAAA CAAGGCCTCC CCAGCTTTTT CTAAGTAAAC CCTAGTAGAA AAGCAAAAAA AAAAAAAAAA
[back to top]

Predicted Small Protein

Name NONHSAT095025_smProtein_656:823
Length 56
Molecular weight 6405.1862
Aromaticity 0.109090909091
Instability index 62.0872727273
Isoelectric point 9.01983642578
Runs 6
Runs residual 0.0424242424242
Runs probability 0.0403786139081
Amino acid sequence MCTRVWKPLAWRYLHIWPQHCTNSRDGIYDQSHCTKRETGSEMKPSAQGPGWVSS
Secondary structure LLLLLLLLHHHHHHEELLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -