NONHSAT095025
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095025 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1590 nt |
Genomic location |
chr4-:6909871..6911439 |
Exon number |
1 |
Exons |
6909871..6911439 |
Genome context |
|
Sequence |
000001 GCGGGCCCGT TCTTCCGCCC GTGCCGCCGC GTCTGGAGCT CGGCGCTCGC CCGGCTGTCC CTCTTCCGGG GGCCGCCCGC 000080
000081 CGCGGGCCTC CGGAGCGGCG TCGCCGGCCC TTTTTTTTTG CCGGAGAACC AACCGGAGTG GCGAGGAGCT GCCTTGAGCG 000160 000161 GGCCTTTGTG CCCGCAGGGC CCCCACGGAC ATCCGACAGG GGGCCCCCTA CCTGGTCGGC TCCACCCGCA GCCATCTTGG 000240 000241 AAGTGGGAAG CGGCCGGGAG GGGGAAGGGG CTCGAGCGGG CAGGGCTCAG GCGTAGGGAG CCGAGCGGCG GAGCGCATCG 000320 000321 ATGGGGCTCC CCTGCCCCGG CCGGTGTGCG GGAGACGGCC CGGGCCCCGC CGCGGAAGGG AAGCTTTGCG TGACACCGGA 000400 000401 GCTCAGGCCC CGCCGCGGTG GTCTTGGGAG CGGCGCCGTG GCGTCCTCCC AGCCAGCCTC AGTCTCTTAA TCTATAAAGG 000480 000481 GCTTTTCGGA ACGTTCTCTC TTATCGCGCT GTGACACGGT GCCTGGCGCT GTAGTTCCCA AACTGGTCTG CACTTTAGTA 000560 000561 TTGCCTGCGG AGCTTTTAAT ATTCTGAAGC CCAGGCCGAT TAAGTCACAG TCTCTGAAGA TGAGATGGAA GCATCATCAG 000640 000641 TTTGGGAAGC TGTGTAATGT GCACGCGGGT TTGGAAGCCA CTGGCCTGGC GTTATCTGCA TATTTGGCCT CAACATTGCA 000720 000721 CAAACTCCAG AGACGGGATC TATGATCAGA GCCATTGTAC AAAGCGGGAA ACGGGCTCAG AGATGAAGCC CTCCGCCCAA 000800 000801 GGACCCGGGT GGGTCAGTAG CTGAGAGGGG CAGAAGCCAG GTTCCCTGCA CCAGAGCCCT CCATGAGCTG GTAGAGAGTA 000880 000881 TGTGAGGAGC CCCTGTTGAC GGGCAGTGGG TCTCCATTCC CCTTCTAGGC TGTGGGTTCC ATGAGGAAAG CCGGGCTTAT 000960 000961 CTTGTTTACT GCTATTTTCC CTGGGCCTGG CAAATAGTTG GTATTTGACG TTATTGGGTT GTCGTTAGAC TCTGGGGACT 001040 001041 TGAGGGCAAG AGGAGAGACC CAGCGCTGGG AGCCAGAAGT CCTGGATTTC CACTTGGCTT TGGCTCCTCC CAACCAGGAG 001120 001121 CCCTGAGGGT TGTCACTGGC AGATAAATTA CCAGAGAGGA AACCCGGGAG AGACTGACTG CAGCCCAATC TAAGGGAAGA 001200 001201 CTCAGCCACT CAGAAAGGTC AGGGGCAGGA GGAGTTTCCG CATTACAGGA AGCATCTGGA AGCATGAAAT GGAAGATTTG 001280 001281 TCTCTACTGC GGTCGTTAGG GATGGGCTAG GGAACCCCGA ACTTGGGTCT CCTCTCCAGC TCATGGCTGT AAAAACCCTG 001360 001361 AGCATCTATG AGATATGACG CAGAAGCAAG AGAGATTTTT AAAGGCGATC TCTTGAAAGC AAAAACATTA ACATCCCTCG 001440 001441 CAGTGCTGCA TCACAGAAAC TTTATAAATG CTTAAATTTC TGGGGGTTTT AAGTAAAAAT AATACGAGGC CTCCTTCATA 001520 001521 CCTCTTAAAA CAAGGCCTCC CCAGCTTTTT CTAAGTAAAC CCTAGTAGAA AAGCAAAAAA AAAAAAAAAA |
Predicted Small Protein
Name | NONHSAT095025_smProtein_656:823 |
Length | 56 |
Molecular weight | 6405.1862 |
Aromaticity | 0.109090909091 |
Instability index | 62.0872727273 |
Isoelectric point | 9.01983642578 |
Runs | 6 |
Runs residual | 0.0424242424242 |
Runs probability | 0.0403786139081 |
Amino acid sequence | MCTRVWKPLAWRYLHIWPQHCTNSRDGIYDQSHCTKRETGSEMKPSAQGPGWVSS |
Secondary structure | LLLLLLLLHHHHHHEELLLLLLLLLLLEEELLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |