NONHSAT095004
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT095004 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1042 nt |
Genomic location |
chr4+:6660761..6677745 |
Exon number |
2 |
Exons |
6660761..6660776,6676720..6677745 |
Genome context |
|
Sequence |
000001 GCGTGGAAGG CGCTGGGTGG CCAACTGACG AACTGTGTTC ACCTGATAAG GAGTCGTGGC TGCTTGGACA GGCTCAAACC 000080
000081 AAGAGAGCCT TTCGTTTTGT CTCCCCTGTT TTTCTGCCTG CGTTTTCTCC ACATTAGCCA CTCAATTTCC AGTACCATCC 000160 000161 TGGCGGATGA CTTCAGCATT AGATGGTCAG GTGTATTTTT TTATTAATAG GCGCATTCAG TTTGGAAAAG ACAGCTTTTC 000240 000241 ATTAATGTCC CACGTAAAGG AATATGGCCT ATACAGTACG TACGCTGCTG CGTGGTCATA TTTGTTCCTG TGATCTTATT 000320 000321 GTATTTTCAA AGTTTGGAAG TATACTCGTG TGCTTTGCTG TTTTTTTATG CTTCCTGGAA TTTGGGGACT CATGAGAGAC 000400 000401 TTGAGGTTAG AGTTCTGCAA GTGAGAAGAC ACTACATGGT TGCAGCTGCC ACATGAAGAA CCCAAGCTCC TGTCAAAGTT 000480 000481 GTGAATGCGA CTTTGGATGA GATTAAGAAG GCCCAGTGGA CGGTTGGTCT TGAAGAGTGG CAGTGTGTGG ATTTGAGGAC 000560 000561 CTCTGCAGAC CATCAGATCA AAGGAGGGAG AGCTGTTTTG GGTGTTTTGT TTTTTTTGTT TTTATAGCAT TTTGCTTTTT 000640 000641 CTTGGAATGT AATTTTCCTA TGGCATGTTA ACTGGTGCAC ATCGTGTAAC CTGTCTGGTG AGCAACCTAC AATTGGGATG 000720 000721 AGTTCTAGGT ACATGTGTTT GCTGACTTTG GGGTAAACAA CTTTGTTATA ATACAGTCTC TGCCACAGAT GCATGTGACC 000800 000801 TCTTCAGGGG CCCAGAGTGG CTGAGGAAGG AAAGCTTCAA GCTGGCCATG GGGGTCCCAA ACAGTCATTC CAGGCTTAGA 000880 000881 TGATGACTAG CCTAGGTCAT CAGAGCCCAG ACTCCACAGA GACTAAAATC AGAGCTCTGT CTTGTTATGA TAAATTTCAT 000960 000961 TTGCTTGGAA AAAGAAATGC TGAAAGCCAG TGTTTAGAAT CTTTGTGCAG ATGACCAAAG CAATTGACTT GGCCAAGAAA 001040 001041 AG |
Predicted Small Protein
Name | NONHSAT095004_smProtein_263:394 |
Length | 44 |
Molecular weight | 4823.7398 |
Aromaticity | 0.162790697674 |
Instability index | 42.4302325581 |
Isoelectric point | 6.49493408203 |
Runs | 10 |
Runs residual | 0.0752547687484 |
Runs probability | 0.0401077548136 |
Amino acid sequence | MAYTVRTLLRGHICSCDLIVFSKFGSILVCFAVFLCFLEFGDS |
Secondary structure | LLHHHHHHHHLLEELLLEEEEELLLLEEEEHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | iiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTTToooooo |