NONHSAT094918
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094918 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
911 nt |
Genomic location |
chr4-:4128386..4129296 |
Exon number |
1 |
Exons |
4128386..4129296 |
Genome context |
|
Sequence |
000001 AGCCACGGAA TCTCACAGAT GTCTGAGAAT TCGTCCTCCT GGGACTCTCA GAGGATCCAG AACTGCAGCC GGTCCTCGCT 000080
000081 TTGCTGTCCC TGTCCCTGTC CATGTATCTG GTCACGGTGC TGAGGAACCT GCTCAGCATC CTGGCTGTCC GCTCTGACTC 000160 000161 CCCCCTCCAC ACCCCCATGT ACTTCTTCCT CTCCAACCTG TGCTGGGCTG ACATCGGTTT CACCTCGGCC ACGGTTCCCA 000240 000241 AGATGATTGT GGAATGCAGT CGCATAGCAG AGTCATCTCT CATGCGGGCT GCCTGACGCA GATGTCTTTC TTGGTCCTTT 000320 000321 TTGCATGTAT AGAAGACATG TTCCTGACTG TGATGGCCTA TGACTGCTTT ATAGCCATCT GTCATCCTCT GCACTACCCA 000400 000401 GTCATCGTGA ATCCTCACCT CTGTGTCTTC TTCATTTTGG TGTCCTTTTT CCTTAGCCTG TTGGATTCCC AGCTGCATAG 000480 000481 CTGGATTGTG TTACAATTCA CCATCATCAA GAATGTGGAA GTCTCTAATT TTGTCTGTGA CCCCTCTCAA CTTCTCAAAC 000560 000561 TTGCCTGTTC TGACAGCGTC ATCAATAGCA TATTCATATA TTTCGATAAT ACTATGTTTG GTTTTCTTCC CATTTCAGGG 000640 000641 ATCCTTTGGT CTTACTATAA AATCGTCCCC TACATTCTCA GGATTTCATC GTCAGATGGG AAGTATAAAG CCTTCGCCAC 000720 000721 CTGTGGCTCT CACCTGGCAG TTGCTTGCTG ATTTTATGGA ACAGGCATTG GCATGTACCT GACTTCAGCT GTGTCACCAC 000800 000801 CCCCCAGGAA TGGTGTGGTG GCATCAGTGA TGTACGCTGT GGTCACCCCC ATGCTGAACC TTTTTATCTA CAGCCTGAGA 000880 000881 AACAGGGACA TACAAAGTGC CCTGCGGAGG C |
Predicted Small Protein
Name | NONHSAT094918_smProtein_512:781 |
Length | 90 |
Molecular weight | 9776.4367 |
Aromaticity | 0.134831460674 |
Instability index | 51.1573033708 |
Isoelectric point | 8.76910400391 |
Runs | 12 |
Runs residual | 0.00837188808107 |
Runs probability | 0.0812135665076 |
Amino acid sequence | MWKSLILSVTPLNFSNLPVLTASSIAYSYISIILCLVFFPFQGSFGLTIKSSPTFSGFHR QMGSIKPSPPVALTWQLLADFMEQALACT |
Secondary structure | LLEEEEEEELLLLLLLLLHHHHHHHHHHHHHHEEEEEEELLLLLEEEEEELLLLLLLHHH HLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiiiiiiiiiiiiiii |