NONHSAT094812
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT094812 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1377 nt |
Genomic location |
chr4-:2837616..2839958 |
Exon number |
2 |
Exons |
2837616..2838740,2839707..2839958 |
Genome context |
|
Sequence |
000001 ggcaaaacta tttcctgatg gtggttgcag atcgttcact tcctaacagt gtgttaggtt gtgcatttat gttttattca 000080
000081 cttttctgta tgttgtttta ttctgcagga aatgaatgaa aaaGGGATTC TGCCTCAGCT CTGAGCCCCT CAGAGTGGGG 000160 000161 CCAGGGAAGA AGCAGACGGC AACGCCAGGG CAGCTGTCTG GCAGCCTGGA AGGCCTGCGA AGCTTCCTAG GGGTCCGAAG 000240 000241 GAGGGTAGAC AGGCACGGGG CTCACCACAA TCCTTCGGAT GGAACCACAG GAAGAGAAGA AGCATGTTTC ACCCTGGGCT 000320 000321 GGGGGTGCTT CCCAAAGCCA CTGGGGCCCT TTTCCCAAGC CCCAGAACTG AGCCCACCTG AACTCATCTT GAAGGtaggt 000400 000401 atgtcagtga gtcctcccaa agcctcagtt tccctatcta taaaatgagg aagcaggact GCCCCTAGGG CAAGGCCTAG 000480 000481 GCCTCCTGCC AGCCCACCCT CACAGACCCA GAGGGCAACG CAGGGTGAGG CGGGGCAGTT TCACTCCCCA GTGCTGTGGC 000560 000561 CCCCTTGGTT GAGTGAAAGC ACCTCCAGAG CCCTAACCCT AGCCCTGGGA GCCAGGCAAG AGACCCCCAC AACGACCATC 000640 000641 AGAGGTCGTG AGGGGTggca gggagcctgg cagggagcca ggcaggggcc aggGTCTagg ctcagagcag tgaaggatag 000720 000721 atagggtcac atgccagtta gtggcagagg tgggacttga acccaggcct ctgtgagact tggttctctc acctgtaaaa 000800 000801 tgggtctact agcagctgct tctccaagca aatgatgtca agcacccagc tcggcacctc acagatgtgg tcagtaaatg 000880 000881 gtaatcccaA CCCTACCCTT ATATGTGGAC TAGAACACTT ATGGCAAGTC TCGGGAGGTC ATGGGAACTC CTCATGGCTC 000960 000961 CTTCTTCATG CTGGAGGACC ACGGCCTGCC CCATCCCACC CCAACACACT CTTGAAACTG AGGCCCTCGG CCTAGAGCAG 001040 001041 CTCACACAGA CGTGGACAGC TGTGCTAGCA GGTGCAGAGT CTGGGAGGCG AGGCTGGACC AGGGCCCCAG CTGGGCTTCG 001120 001121 GGTAACCACA GGCCTCAACT GTCCAGTTGG CCAGAGGGAC CTATCACCTG GCTCTGGGCC CCAGGATGCT TTAGCCACTT 001200 001201 GAGCCGGCTC CAGGTGACCG TGTAAGTGAC ATAAAGCAAA GGTGTCCTGG ACTGCACCAC TCACTAGCTC AGCACCCCAG 001280 001281 GCACCAGGCT GGAAACCACA TCTCGCACCC AATTCTCCAT TTAAAAATTT TACAGGAAGG ggccaggcac agtggctcat 001360 001361 gcctgtaatc ccagcac |
Predicted Small Protein
Name | NONHSAT094812_smProtein_902:1201 |
Length | 100 |
Molecular weight | 10603.9825 |
Aromaticity | 0.0505050505051 |
Instability index | 57.0858585859 |
Isoelectric point | 7.76519775391 |
Runs | 15 |
Runs residual | 0.017825311943 |
Runs probability | 0.0330860272037 |
Amino acid sequence | MWTRTLMASLGRSWELLMAPSSCWRTTACPIPPQHTLETEALGLEQLTQTWTAVLAGAES GRRGWTRAPAGLRVTTGLNCPVGQRDLSPGSGPQDALAT |
Secondary structure | LLHHHHHHHHHLLLLEEELLLLLLLLLLLLLLLLLLHHHHHHLHHHHHHHHHHHHHHHHL LLLLEEELLLLLEEELLLLLLLLLLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |