NONHSAT094610
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094610 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1231 nt |
Genomic location |
chr4-:755337..775598 |
Exon number |
2 |
Exons |
755337..756528,775560..775598 |
Genome context |
|
Sequence |
000001 CGCCGCTCAC CCCGCGGCCG CACCTTCCCG CCTTCTCAGG CTCCAGGGGA GAAGCACagt ccattccgtg ctgctgccac 000080
000081 agaacaccac acactgggtg atttatgaag aacaaattga tttcggcaca gttctgggag ctgggacatt caaggtcacc 000160 000161 acgttgccac ctgtgaaggc cttctgctgc atcctcatgt tggggaagat cagaagtgag aacacatgct ggccagtcct 000240 000241 ttcacagcag catcaatccg tgcatggggc agggccctcg gcctgagcgc ctcccccagg ccctaactcc cagcactgcc 000320 000321 ctgctgggga tggaatttcc aacatgaatc tgggggatgc tttcggacca cagcCGGGGA GCCTGCCCTG GCTTCCAGCT 000400 000401 GCTGGTGGCC CAGGGGCTCC CTGGCTTGCC TCGAGGCTGC CTCCCTCCAG CCTCCAGTCC GTCCTCTGCT CTGTCCTCAC 000480 000481 CAGGGCCTCC TGTCTCGAGT CTTCCTCCGC CTCACTTGTG tcatgggatt taggctccac ccagatattc cagaattatt 000560 000561 tcatcccaaa atcctttatt taattatatc tacaaagatc cttttccaaa caagatccca tttgcaggct ctgggggtta 000640 000641 ggatgtggct tatcttctgg ggCCACCACT GAGTCCACTG CTGCTACAGA CAGCATCTCA AGTCTGTCCA CTTCTCCACC 000720 000721 CTGACCGCCC CCACCACAGT CCGCCTCTCC TGCAACTCCT GGCGCTGGCC TCTCCTGCGT CCATTTCTGC ACAGCCTGAG 000800 000801 CGATTTTCAA AAACGACACC AGACCCATGC TCCTGCCCAC AGCCGCCAGC GCCTTCTGTC TCCATGCAAA GCTGGACCCT 000880 000881 GCTGGCGCCT GCATCCCCAT GGTGTCACTG CCTTGGGGGC TCACAGGGAC CCACACTGGC ATGTTCATGG TGCGCCCGCT 000960 000961 GCCAAGGCCG CCTCATGCCA GCACTCCTTC GTCTCCTTAC ACACCACAGC CTGGAAGGGT CCTCCCTCTC TGCATCCGCC 001040 001041 CATGTCTCCC CTTGTGAAAT TAAAGCACAG AATTTCTCGT TTTGAGGAAA ACCTTTATCC TATTTTAAAA CAGTCTCATC 001120 001121 ATCCCCGCCC TAGTTCTCTC TTCCACTCAC AGTAGCATTC CACGTTCCCT GTCTCTGGGC ATCCTACAAC CCTTAGGGCT 001200 001201 GTCTCCTATC CCGCTCCCCG GTGAAGCAGG C |
Predicted Small Protein
Name | NONHSAT094610_smProtein_863:1084 |
Length | 74 |
Molecular weight | 7840.0159 |
Aromaticity | 0.0684931506849 |
Instability index | 57.2849315068 |
Isoelectric point | 8.32281494141 |
Runs | 12 |
Runs residual | 0.0202386212992 |
Runs probability | 0.035417770712 |
Amino acid sequence | MQSWTLLAPASPWCHCLGGSQGPTLACSWCARCQGRLMPALLRLLTHHSLEGSSLSASAH VSPCEIKAQNFSF |
Secondary structure | LLLEEELLLLLLLLLLLLLLLLHHHHHHHHHHHHLLHHHHHHHHHHHLLLLLLLLLLLEE ELHHHEEELLLLL |
PRMN | - |
PiMo | - |