NONHSAT094507
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094507 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1453 nt |
Genomic location |
chr4-:123966..125423 |
Exon number |
2 |
Exons |
123966..124896,124902..125423 |
Genome context |
|
Sequence |
000001 AGAAAACTTG CGGAGTTTCC TCAACACCAG TCAATGCTCC Aaccccaacg gggtgtccag caactcacta acgacaccac 000080
000081 ccagagtcag cgctgacccc acaagctcag cactcttccc gcagctgctc tcctgcagac gccagtccct gcctctggac 000160 000161 acccgtcttc atttctgaac ccctgcctac aaaccaggga cgcccacacc ctcctcaagt tcaataatgt ggcagaacta 000240 000241 ctcacagaac taagagaagc gctgtgcgca ccgacaccag cgtattctaa aagatgcgaa cagacaccag cgtattcagg 000320 000321 aacagccacg cggaggaggc gcacagggca aggGGACTGG CGGCAAAGTT GGCGCAGGCA GGTGatttgc ttcgcttcct 000400 000401 cacacacctc acaaaagcct ttccttcaag acccgctggc agtccccaaa ccacgagcca cggcagagct ttcccattaa 000480 000481 taagtcctgt tttgctcaca tgaactccat gttttgatgg gctctcattc tgaacagggt aaagtaggga cgggattccg 000560 000561 gaccaCAGCT CCTCCCACGC CGGCACCGCG CAGGCCGCCG CGGTGTCTTC CGGATGAGCT CCTACTCACT CCACAGCCCG 000640 000641 GGGAAAGTGC AGGGCTACCG GCGCAGAGCT GCACAAGGAG GGCTGCAGGC TGGGCCAGAG CCGCTGTACG GGGACTGACA 000720 000721 AGAGCGCGGG TCCCTCACCG GAGGGGACTG AGGACAGAGG GCTGAGCGGG AACTCCATTC ACAGACTCCT CCCACCGCCG 000800 000801 CCATTTCCCG CCGGTTCCGA TGAGGCCTCC ACAGCCTTGG GACGCCCTGC CCTGCACACT CACCATTTCC CGACTTCAGG 000880 000881 AGTGTCCCAG AGTCTTAGAT ACGAATCATC CAATACCGGC AGGTCACAGA GCCACAGAGG CTGAGGCTGT GGCAGAATCA 000960 000961 CCGAGGCTTC CCTAAGGAGC GGGAGCAGAG CGATGAGGCC CTAACCGAGC TCTGGCTGGA GCTACAAGCA AAAGCCGCGC 001040 001041 CAGATCCCGG ATGCCGCACC CTCCTCTCTG CTGCGCGCCT CATTCGGCAG TTGTCAATCC AGCGCTCTAA TTGGATAGAG 001120 001121 CTGTAAGTCT CCCGCCTCAG GCCTTGAGTG ACAGAAGTTG CAACCATACA CAGCACTGAA TGAGGCGAGA GTGACAGGCT 001200 001201 CTGGCCTCCT GGTACTTTGA GGCAGGtttt ttgtgtttgt tttttgagtc tggctcttct cgcccaggct ggagtgcagt 001280 001281 ggcgcgaact cggctctctg caacctctgc ctcccgggtt taagcgattc tcctcagcct cccaagtagc tgggattaca 001360 001361 ggtgcccacc accacacccg gccaatttct gtatttttag cagagacagg gtttcaccat gttggccagg ctggtcttga 001440 001441 actcctgacc tca |
Predicted Small Protein
Name | NONHSAT094507_smProtein_293:502 |
Length | 70 |
Molecular weight | 7479.4613 |
Aromaticity | 0.0579710144928 |
Instability index | 45.7608695652 |
Isoelectric point | 11.6162719727 |
Runs | 7 |
Runs residual | 0.0378820490745 |
Runs probability | 0.0256895551014 |
Amino acid sequence | MRTDTSVFRNSHAEEAHRARGLAAKLAQAGDLLRFLTHLTKAFPSRPAGSPQTTSHGRAF PLISPVLLT |
Secondary structure | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEE LLLLLEELL |
PRMN | - |
PiMo | - |