NONHSAT094507

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT094507

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

1453 nt

Genomic location

chr4-:123966..125423

Exon number

2

Exons

123966..124896,124902..125423

Genome context

Sequence
000001 AGAAAACTTG CGGAGTTTCC TCAACACCAG TCAATGCTCC Aaccccaacg gggtgtccag caactcacta acgacaccac 000080
000081 ccagagtcag cgctgacccc acaagctcag cactcttccc gcagctgctc tcctgcagac gccagtccct gcctctggac 000160
000161 acccgtcttc atttctgaac ccctgcctac aaaccaggga cgcccacacc ctcctcaagt tcaataatgt ggcagaacta 000240
000241 ctcacagaac taagagaagc gctgtgcgca ccgacaccag cgtattctaa aagatgcgaa cagacaccag cgtattcagg 000320
000321 aacagccacg cggaggaggc gcacagggca aggGGACTGG CGGCAAAGTT GGCGCAGGCA GGTGatttgc ttcgcttcct 000400
000401 cacacacctc acaaaagcct ttccttcaag acccgctggc agtccccaaa ccacgagcca cggcagagct ttcccattaa 000480
000481 taagtcctgt tttgctcaca tgaactccat gttttgatgg gctctcattc tgaacagggt aaagtaggga cgggattccg 000560
000561 gaccaCAGCT CCTCCCACGC CGGCACCGCG CAGGCCGCCG CGGTGTCTTC CGGATGAGCT CCTACTCACT CCACAGCCCG 000640
000641 GGGAAAGTGC AGGGCTACCG GCGCAGAGCT GCACAAGGAG GGCTGCAGGC TGGGCCAGAG CCGCTGTACG GGGACTGACA 000720
000721 AGAGCGCGGG TCCCTCACCG GAGGGGACTG AGGACAGAGG GCTGAGCGGG AACTCCATTC ACAGACTCCT CCCACCGCCG 000800
000801 CCATTTCCCG CCGGTTCCGA TGAGGCCTCC ACAGCCTTGG GACGCCCTGC CCTGCACACT CACCATTTCC CGACTTCAGG 000880
000881 AGTGTCCCAG AGTCTTAGAT ACGAATCATC CAATACCGGC AGGTCACAGA GCCACAGAGG CTGAGGCTGT GGCAGAATCA 000960
000961 CCGAGGCTTC CCTAAGGAGC GGGAGCAGAG CGATGAGGCC CTAACCGAGC TCTGGCTGGA GCTACAAGCA AAAGCCGCGC 001040
001041 CAGATCCCGG ATGCCGCACC CTCCTCTCTG CTGCGCGCCT CATTCGGCAG TTGTCAATCC AGCGCTCTAA TTGGATAGAG 001120
001121 CTGTAAGTCT CCCGCCTCAG GCCTTGAGTG ACAGAAGTTG CAACCATACA CAGCACTGAA TGAGGCGAGA GTGACAGGCT 001200
001201 CTGGCCTCCT GGTACTTTGA GGCAGGtttt ttgtgtttgt tttttgagtc tggctcttct cgcccaggct ggagtgcagt 001280
001281 ggcgcgaact cggctctctg caacctctgc ctcccgggtt taagcgattc tcctcagcct cccaagtagc tgggattaca 001360
001361 ggtgcccacc accacacccg gccaatttct gtatttttag cagagacagg gtttcaccat gttggccagg ctggtcttga 001440
001441 actcctgacc tca
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Predicted Small Protein

Name NONHSAT094507_smProtein_293:502
Length 70
Molecular weight 7479.4613
Aromaticity 0.0579710144928
Instability index 45.7608695652
Isoelectric point 11.6162719727
Runs 7
Runs residual 0.0378820490745
Runs probability 0.0256895551014
Amino acid sequence MRTDTSVFRNSHAEEAHRARGLAAKLAQAGDLLRFLTHLTKAFPSRPAGSPQTTSHGRAF
PLISPVLLT
Secondary structure LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLEE
LLLLLEELL
PRMN -
PiMo -