NONHSAT094327
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT094327 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1162 nt |
Genomic location |
chr3+:196045245..196052758 |
Exon number |
4 |
Exons |
196045245..196045308,196050628..196050852,196051153..196051737,196052471..196052758 |
Genome context |
|
Sequence |
000001 GGCAGTATCA GCCGCGCCGC AGTCGGAGGA AATAGACGCG GGGCCTGAGG CTCCTGGACT TGAGAAAGGA TTCAAGACAG 000080
000081 CCGATGATGA AAACACCCAT GCTTGCAAGT GAAGGTTCTG CCTGTCACTT CTCGCAGAGG CTGCAGAAAA GGCCCAGGAG 000160 000161 GCTGTTGATG ACATGAACGA CCACCAGGAG AAGCTGGAGC AGGCTGATGC ACAGAAGGGC GGAGAAGAGG GACACGTGCC 000240 000241 AGACAACAGC TGCAGAGGGC TCCAGGCAGA CGGAGTTCCA GAGCGAACGG TCTTTGAATG GGTAACCATA TTTCCAAGCT 000320 000321 TGTGTCTGAT TGAAGGATGA AACATCAAAC ATGCAAAAAG GACCATCTTT CAGAGCAACT CCAGAAGTGA CAAAGCAAAT 000400 000401 CAGGGCTCCA AGTAAAGCCA GGCCACCTGA CAACAGAGCA GTAAGCACCT GCGGAGGGAG GAGAAACACT GAGCTAAGAC 000480 000481 GGGGTCGCAG CTGGGGAGCC TGCGGAGGGA GGAGAAACGC TGAGCTAAGA CGGGGTCGCA GCTGGGGAGT CTGTGGGGCG 000560 000561 GTCTGCACAG GTCTGACTTC TCTGGTCTCA GTGTTCTTCC GTCCTGTCAT GGGGGAGAAT TCTGTCCATG GCACCCCCTT 000640 000641 TGAAGCATAA CCCATGGTGG GGAGGCCGTG AGGGGTTTCT AGGAGAGAAA GGACCAAGAA GCAGAATCGC AGGCCCCGGA 000720 000721 TCTCCCTGAC CGTGAGTTCG CCTGAGCTGC TCAGCAGCTT GGCATCACAA ACCTTTTGCA CATTACAGCC ATTCAGCCTC 000800 000801 TGAGCTAAAG AAGAAGCTAC CACAGGCCCA CCACTGACTC TTCTAAGGAA AAGCTGCATT TTCAAAAGTT CCAGAGTCAT 000880 000881 GGAGTCATTC TCCCACTGAG GTCAAGCTGG TTTGGAGTTG GGGAGGGATC AGACAAAGGT GCATAGTAAG TTTTGACTCT 000960 000961 GAGTTAAAGG AGTCAAGATG AATCAGTAAG CCTAGGGcag tggttcccaa aatggggtcc ctgcccagcc gcatcacatc 001040 001041 acctgagaac ctgttagaaa tgcaaaactt ccccgccatc ctgaatcaga aactctgggg agggagccca gcaatccgtg 001120 001121 ttccggcaaa agccctccag gtgattctca tgcacattca ag |
Predicted Small Protein
Name | NONHSAT094327_smProtein_350:649 |
Length | 100 |
Molecular weight | 10745.14 |
Aromaticity | 0.0606060606061 |
Instability index | 67.0343434343 |
Isoelectric point | 11.5736694336 |
Runs | 13 |
Runs residual | 0.00237670825906 |
Runs probability | 0.0470696941285 |
Amino acid sequence | MQKGPSFRATPEVTKQIRAPSKARPPDNRAVSTCGGRRNTELRRGRSWGACGGRRNAELR RGRSWGVCGAVCTGLTSLVSVFFRPVMGENSVHGTPFEA |
Secondary structure | LLLLLLLLLLHHHHHHLLLLLLLLLLLLLEEELLLLLLLLEEEELLLLLLLLLLLLEEEE LLLLEEEEEEEEELLEEEEEEEEEELLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |