NONHSAT094238

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT094238

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1859 nt

Genomic location

chr3-:195439814..195442003

Exon number

3

Exons

195439814..195440230,195440438..195440847,195440972..195442003

Genome context

Sequence
000001 gcttatcagg gtattaaatg tgtttctgac ttacagtatt tttgacttac cacgtgttta ttgggacgta accccttcct 000080
000081 aagatgaaga gcatctgTAT ACATCCAGAA Tcctgtggag caactcataa cccatgagga atggaagccg acagacagac 000160
000161 tcatccccag gacaggtggt tctcactaca tctcataaag cttcttagaa gatcttacag gattgagcaa ccagccagcc 000240
000241 acagcagggg ccaactggat aacacgtctt tgcataggct ctccctctgt ccctgtcacc ctcccctttt cctaaccttg 000320
000321 ttccttggga ttatgttttg aaataaatta TTCAGAGAAA TGAAGCCAAA GCTGACCCAT TAGCCAATAG CTAGGTTCTG 000400
000401 TGATGACAGA GCTTCTGGGC TATAATCGTT TACTGAGAAG CCAGCGTTCC TGAGGGGATA ATGGCTCGTT CCATTCAgct 000480
000481 gcagcatagg agtgagggca gggcattagc agaagataac accagaaacg tgctctgggg cctgttgatg actttctgtg 000560
000561 ccaagcacag acatttagcc tttattctgt atgtgatggg aagccagtgc cagtggtggg tttgagcagg gaaCCAGCAA 000640
000641 CCAGTGGTGG GTTTGAGCAG GGAACCAGCA ATACTCAAGC TCTGCTTGGA TGGAGGCCAG TCAGGGAGGA GTTAGGGCAG 000720
000721 GAGGACCAGT CAGGGAGGAG ACTTAGGGCA GGAGGACCAG TCAGGGAGGA GACTTAGGGC AGGAGGACCG GTCAGGGAGG 000800
000801 AGACTTAGGG CAGGAGTACT GGTCAGGGAG GAGACTTAGG GCAGGAGGAC CGGTCAGGGA GGAGACTTag ggcaggagga 000880
000881 ccggtcaggg aggagactta gggcaggagg accggtcagg gaggagttag ggctggagga cgggtcaggg aggagactta 000960
000961 gggcaggagg accggtcagg gaggagttag ggctggagga ccggtcaggg aggagttagg gcaggaggac tggtcaggga 001040
001041 ggagttaggg ctggaggacg ggtcagggag gagttagggc tggaggaccg gtcagggagg agttagggca ggaggacagg 001120
001121 tcagggagga gttaggggag gaggaccggt cagggaggag ttagggcagg gggattggtc agggaggagt tagggcaggg 001200
001201 GGATTGGTCA GGGAGGAGTT agggcaggag gaccggtcag ggaggagtta gggcaggagg accggtcagg gaggagactt 001280
001281 agggcaggag gactggtcag ggaggagtta gggcaggagg accggtcagg gaggagttag ggcaggagga ccggtcaggg 001360
001361 aggagactta gggcagggGG ATTCGTCAGG GAGGAGTTag ggcaggagga ccggtcaggg aggagttagg gcaggaggac 001440
001441 tggtcaggga ggagttaggg caggaggacg ggtcagggag gagttagggg aggaggactg gtcagggagg agttagggct 001520
001521 ggaggaccgg tcagggagga gttagggcag gaggaccggt cagggAGGAG TTAGGGCTGG AGGACCGGTC AGGGAGGAGT 001600
001601 Tagggcagga ggaccggtca gggaggagtt agggcaggag gaccggtcag ggaggagact tagggcagga ggactggtca 001680
001681 gggaggagtt agggctggag gaccggtcag ggaggagtta gggcaggagg actggtcagg gaggagttag ggcaggagga 001760
001761 caggtcaggg AGGAGACTTA GGGCAGGAGG ACCGGTCAGG GAGGAGACTT AGGGCAGGAG GACTGGTCAG GGAGGAGTTa 001840
001841 gggcaggagg accggtcag
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Predicted Small Protein

Name NONHSAT094238_smProtein_140:340
Length 67
Molecular weight 7827.0236
Aromaticity 0.0909090909091
Instability index 60.0621212121
Isoelectric point 9.49005126953
Runs 7
Runs residual 0.0445472690982
Runs probability 0.0196204607969
Amino acid sequence MEADRQTHPQDRWFSLHLIKLLRRSYRIEQPASHSRGQLDNTSLHRLSLCPCHPPLFLTL
FLGIMF
Secondary structure LLLLLLLLLLLLHHHHHHHHHHHHHHLEELLLLLLLLLLLLLLLLLLLLLLLLLHHHHHH
HHHHLL
PRMN -
PiMo -