NONHSAT092154

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT092154

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

579 nt

Genomic location

chr3+:131236671..131239724

Exon number

2

Exons

131236671..131236753,131239229..131239724

Genome context

Sequence
000001 ACTCTAGAGC ATCaagacaa aaatctcagt cttcgaggaa ctcacagtgt agcagaaaag acaaaggagg taaacagGAG 000080
000081 GAGCATGAAT AATTCATCTT GATGTAATCA TGCAAGACTC CTAAGAAGAT GTTAGGAGAC CCTGTCATCA TTCTTTTGGC 000160
000161 CTCTAGTGTC CTTTATCTTC ATGTTTGCTG GCTTCCTTTT ACTACTATGG AAATACAACA TATGCAAAAG TAGTGTTTTC 000240
000241 ACTGTTTAAA AACATCGTCA GCAGCATCAT CATCATTAAC TGCACCAGGA AGCCATGACT CCTTTCTGGA CAAGGTGCAC 000320
000321 TTGCCTGTCA TCCTTCCATC TCTTTCTTCC TCCTTGAAGT TCACAATACC CAGTCCAGGA GCATTGCAGA GAATGCTAGG 000400
000401 TGTGTCTGCA GACTTGACTT TAAAAGAAAA CAAGTTCCTT CAAGTGAGTT CATCATGATG GGAATGATAA TTTGTTTGAG 000480
000481 AGAATGTGTG TTCTTTGGCA AAGGAACTCC TGTTATACCA TGACAGTAAT AATAGCAGTA ATAAAATCAC Caataataaa 000560
000561 tttacttttg aatttattt
[back to top]

Predicted Small Protein

Name NONHSAT092154_smProtein_128:232
Length 35
Molecular weight 3928.7472
Aromaticity 0.0882352941176
Instability index 52.0705882353
Isoelectric point 5.94903564453
Runs 8
Runs residual 0.0491437081162
Runs probability 0.03695239357
Amino acid sequence MLGDPVIILLASSVLYLHVCWLPFTTMEIQHMQK
Secondary structure LLLLLLEEEELLLHHHHHHEELLHHHHHHHHHLL
PRMN LLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLL
PiMo ooooooTTTTTTTTTTTTTTTTTTiiiiiiiiii