NONHSAT091415
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091415 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
1129 nt |
Genomic location |
chr3+:119747587..119748715 |
Exon number |
1 |
Exons |
119747587..119748715 |
Genome context |
|
Sequence |
000001 ATGGCCTGGT GAGGCTGGGC AGAGAGAGGT TGGGGCAGCG ACCAGGCGTG GTCTCCGCCA GTGGGCGGCC GCAGCTGCAA 000080
000081 GGAACTCACT GAGGCCCTAG CCCCGCCACG GCTGCTCAGA CGCAGGTTTG GCTTCTTCGC AAAAATGTGG ATTCAGAAAA 000160 000161 GCACCCAGGA AGGCTGAACC TCAAAGATCA GACACAGGCA CAAGTGGTGA AGCATACAAG AGAAGTGCTT TGGTTCCTCC 000240 000241 TGTGGAAGAA ACGGCCTTTT ATCCTTCTTT GTATCCTATA GGGACTCTCA TAAAATCTTT ATTTTTTACT GTTGGGTTTA 000320 000321 CAGGCTGTGC ATTTGGATCA GCTACTATTT GGCAATATGA ATCACTGAAA TCCAGGGTCC AGAGTTATTT TGATGATATA 000400 000401 AAAGCTGACG GTTGGGATAG CATAAGATCA CAAAAAAGAG ACTTCAGAAA GGAGATTAAC AAGTGGTAGA ATAACCTAAG 000480 000481 CGATGGCCAC CAGACTATGA CAGGTTATCA CAGCTGCAAA TGAATGTCTT TGTATTCTGT TTATAGAGAG TACCTTCTCT 000560 000561 GCAGCGGACA ATGATCAGAT ATTTCGCATC TAATCCAGCC TCAAAAGCCC TTTCTTTTCC AATGTTGCTG TCAACATTCA 000640 000641 GTCATTTCTC CTTATTTCAC ATGGCAGCAA ATATCTTATG TTTTGTGGAG CTTCGCCTCC AGCACAGTGA ACATTCTGGA 000720 000721 TCAAGAGCAG TGTTATTATC TGCAGGTGTT ATTTCCAATT GTGTCAGTTA TGTGTGTAAA GTTGCCACAG GAAGATAGGG 000800 000801 ACCATCACTT GGTGCATCTG GCACCATCAT GATGGTCTTT GCAGCTGTCT GCACTAAGAT CCCAGAAGGG AGGCTTGCCA 000880 000881 TTATTTCCCT TCAGATGTTC ACATTCATAG CAGAGAATGC CCTAAAAGCC ATTATGGCCA TGGATACAGC AGAAATCTTC 000960 000961 ATGGGATGGA AATTTTTTTA TCATGCAGTG CATCCTGGGG GAGCTCTCTT TGGAATATGG TATGTTACTT ATGGTCATTA 001040 001041 ACTGTTTTGG AAGAACAGGG AGCTTCTAGT GAAAATCTGG CACGAAATGA GGACTAATGG CCCCCAAAAA AGGAGGTGGC 001120 001121 TCTAAGTAA |
Predicted Small Protein
Name | NONHSAT091415_smProtein_965:1096 |
Length | 44 |
Molecular weight | 4858.3737 |
Aromaticity | 0.116279069767 |
Instability index | 64.1720930233 |
Isoelectric point | 3.99945068359 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.029487470664 |
Amino acid sequence | MEIFLSCSASWGSSLWNMVCYLWSLTVLEEQGASSENLARNED |
Secondary structure | LEEEEEELLLHHHHHHHHHHHHHHHHHHHHLLLLHHHHHLLLL |
PRMN | - |
PiMo | - |