NONHSAT091132
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091132 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1554 nt |
Genomic location |
chr3+:110607663..110640510 |
Exon number |
4 |
Exons |
110607663..110607756,110620481..110620612,110624630..110624748,110639356..110640510 |
Genome context |
|
Sequence |
000001 GGAGGAGCCA AGATGGCCGA ATAGGAACAG CTCCCGTCTG CAGCTCCCAG CGTGAGCGAC GCAGAAGACG GTGATTTCTG 000080
000081 CATTTCCATC TGAGGTTGTA CAAGAATAAT CTGGAAACAT CACACTAAAG AAGAGGAAAG CAGTATAATC TGGAGGACTC 000160 000161 AAATTTAGAG TCACACCAAA GGGATCCAAA TCCCTGATTC AGCAATTATT TTCTGTGTGA ACTCAGTAAG TCATTTGGAT 000240 000241 CCTCACATAC TCCAGCCAGT AATTGAAGAC ATAAGAATCT CCACAGCTTT ACTGCAAGAA GGGGAGTCTT TGAACACATG 000320 000321 TTATACGCAT GTCAGCAAAT TGAAGATTAT TGAAACACCT TTAGCTGACT GAGGATGATA TGGCTGAGGT TAGCTGGAAG 000400 000401 TTTAGAATCC CCTGAAAAAC TTACCACAAA GAATAGATTC TGGACTACAG AGTCAGGCTG CAGATTACGC CTGGGTTTTC 000480 000481 TTAGGCATGG TTTTCTTCCA TGGAAAACTT TCCTGAACCA ACCACCTTGA CACAGTGGGT TTGCCACAAA AAGAAAATAA 000560 000561 ATAAGTAAGC TGTGTGAGCA CATATGTGTT GAGAGTGTGT GTATGTATGT GGCTGCATGA TATTGGGTCC ACTGTCTGCT 000640 000641 GGCAAGGGGT AACCATGGCT GAGGTGACCA CTGCTCAGAA GGCTTCGTCT CCCTACTCAG ACCTACACCT TTGGAATCTC 000720 000721 AGCAGGGCAC AGTGAGAAAG CAGCACCATT TTCAACAGCC AACACCTACC CAGTGAAGCC AGAGACTGCA GACAACCAAT 000800 000801 CAACTGATTT CCTCTTGATG GAATTTGGTT ATAATCTCAA TTACCCACGG AATCTGAGAT AGCCTCTGGA TTATTGAGCT 000880 000881 CTGCTAGAAC AGTGGTATCC TTATAATGCT AAGATGGCTG CTCCAGGTCA AGCTGAATTG AATATTTAAA GAGATATGTC 000960 000961 CCCATTTGGT TCTGAGGTTC ATAAATGCTA GTGAATCTAT GCAAAAATAC ATCATTTAAC ATTTATTCCA AGCTTACTGT 001040 001041 ATGCCAGACA CAGCAGCAAG CACTTCACAC ATATTAACCT TCATCATGTC TTATTCTTAT CTTCACCATG TCATGCTTTG 001120 001121 ACAAAAGATC ACACAATCAT TAAGTGAAAG GCAAGCATTC AAACTCAGTC CCATCTGATT CAAGATCAGT TTGGCAATAT 001200 001201 AGAAGAAATC AGCTAGTATT ATCAATCTCA AATTTCAAAT GCTATTATGA AAATCTCTTA GTAAAGAAAA TAATAAATAG 001280 001281 CTGCAGCCCT GTTCATTTAA GGCGTTAGCT ACTTAATCTC TTAAAATCAA TCCCCTAGGG AGAGTACTGA TTTATTAGAG 001360 001361 AAAAATGAAT GCAGTACAAT ATAAACATTA CATTTTCAGA GAATAATTTC TAAGAAATTC TAAGTGAAGA TCAGTCAATG 001440 001441 ATGTTGTTAG TACACTTAAT ACTTTATCTT TCTATATATT TTACATTGTA TAACCCACCC ACAAAAAAAA AAAAAAAAAA 001520 001521 AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAA |
Predicted Small Protein
Name | NONHSAT091132_smProtein_374:529 |
Length | 52 |
Molecular weight | 6032.0115 |
Aromaticity | 0.137254901961 |
Instability index | 55.7431372549 |
Isoelectric point | 10.8866577148 |
Runs | 9 |
Runs residual | 0.0222286934576 |
Runs probability | 0.0357121827711 |
Amino acid sequence | MIWLRLAGSLESPEKLTTKNRFWTTESGCRLRLGFLRHGFLPWKTFLNQPP |
Secondary structure | LEEELLLLLLLLLLLLLLLLLEEELLLLLEEEELLLLLLLLLLHHHLLLLL |
PRMN | - |
PiMo | - |