NONHSAT091097
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT091097 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
620 nt |
Genomic location |
chr3+:108541620..108566227 |
Exon number |
4 |
Exons |
108541620..108541781,108549517..108549627,108557781..108557814,108565915..108566227 |
Genome context |
|
Sequence |
000001 GAAAAGAATC CGAGGCACAG ATAAAGATAA GTTTTACTGT CATGCTGCTT TTAACATAAC AGAGCAACAT CACCTAGGAA 000080
000081 AAAAGTTTGT AGGAGGATTT TTAATCCATA TATTTGTCTT ATGGCTAGAT AAAGATTTCT CTGAAAAAAA GAAGCATGTC 000160 000161 AGGAATCTCT GGGTGCCCCT TTTTCCTCTG GGGACTTCTA GCATTGTTGG GCTTGGCTTT GGTTATATCA CTGATCTTCA 000240 000241 ATATTTCCCA CTATGTGGAA AAGCAACGAC AAGATAAAAT GTACAGCTAC TCCAGTGACC ACACCAGGGT TGATGAGTAT 000320 000321 TATATTGAAG ACACACCAAT TTATGGTAAC TTAGATGATA TGATTTCAGG TAAGTTTTCC ATAAGTTAAA TTTATAAATA 000400 000401 AGTAAATCCC AGTTGGTTTC ACAAAATAAT TTAAGTGGCG CTTTAAAAAA ATCAAATCAC ACTTAGCTAT CCCAGTGATA 000480 000481 ACCATCAATT CAAGAACTTT TAGTATATTA ATTAGGCTAC ATTTCCAAAG CTGCATATTG TAAGTTGTAT TACAATAGCC 000560 000561 ACTCTAAATC AACATCCTGT TTTTCTATAT TCTCTTCATT TCACTCTAGT AGTAATGAGA |
Predicted Small Protein
Name | NONHSAT091097_smProtein_155:388 |
Length | 78 |
Molecular weight | 8774.9344 |
Aromaticity | 0.142857142857 |
Instability index | 51.0181818182 |
Isoelectric point | 4.73504638672 |
Runs | 11 |
Runs residual | 0.00677583286279 |
Runs probability | 0.0601483836778 |
Amino acid sequence | MSGISGCPFFLWGLLALLGLALVISLIFNISHYVEKQRQDKMYSYSSDHTRVDEYYIEDT PIYGNLDDMISGKFSIS |
Secondary structure | LLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLEEEELLLLLLLLEEEEELL LLLLLHHHHHLLEEELL |
PRMN | LLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLL |
PiMo | ooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiiiiiii |