NONHSAT091077

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT091077

Source

NONCODE4.0

Same with

,

Classification

sense

Length

6796 nt

Genomic location

chr3-:107762145..107773586

Exon number

2

Exons

107762145..107766139,107770786..107773586

Genome context

Sequence
000001 AGATATTTTC TTGTTCAATT TAAGGAGAGG TAAATTTGGT ATCAATAGAA AAAATGTTTC TGAAAAATTT AAACCCTGGA 000080
000081 AATGTATTTA TGGCATGGAG TCAGATGTTT CAGGGAGAGA AGAACAAATC AAGAAGCATT GCAAGTATGC TCATATGGAA 000160
000161 TGCTTAAGGC TTGTGGTTAA AAAATATATA TATATGGCTG TCAATGTCTT AGGCTCATGG TAGCAGCAGA AATCGTAATA 000240
000241 ATTCTTTTGT CACATGGGTT ATATCCATAT TGGAGAGAAT TAACTCAGGT GAAATTAACT TGTACACTGT TTGGTTTTAT 000320
000321 AATATTTAGA GGGATCACAA CTGACTGATG TCCCTTTGAA GTACCATTCT TCATAAATCT TTTTTTTTCA GAATGGGCCA 000400
000401 GCCAACTGTG ACATCCCTTG GATCGGAGAT TTAGAACTAG AAAGTATTCT TTCTACATTA TTAGGGAAGA AAAGGAGTTA 000480
000481 CTTGGCGGTT AGCAATATTC TATTTTGttt tgttttgttt ttagagacag ggtctcatta tgttgaccag gctggcctcg 000560
000561 agctcctggg ctcaagcaat gctcccacct cagcctccca agtagctggg actacaggca tgtgccacta cacctggcAG 000640
000641 TGTTTATTCT GATAAATACA TTTATGAGCT CAAAAATGTA ACTCTAAAAC CTTATCTCTG AACTTCCATA TTACCATCAG 000720
000721 AAATTTAGAT AGTTGTTTAG TTCTCTTTTT CTTTGTAGAA CATAGATATA AGGCATGGTT TCATTGAAGT CAGTTGTATA 000800
000801 TACATGTAAC TATCCTGATG TTCCCAAATA AAGCTCTGTA TTTCTGCTTA GTTTATTGGG GAGGCTGCTA AATGTAGTGC 000880
000881 ATCCCAACCC ATTTTACCCT GTTCTACTTT AAAAAGAGGT TGGCTTCTTG TTTGGATACA AGGACCAAGT CACTCCCCCA 000960
000961 GGTTCCTCCA CAGTAAGGGA GGCCTATTTA AAGCCGCCCA TGGCACTAAC AGAAACTGGA CTCCTATGAG CTCAGATACA 001040
001041 TAACTGGGCC TCACAGGGGT GGGACAGTAT GTAGTCTAGG AATTGGAAGG ATCCATTCCA TATCAAAGAA CTGAAGCATC 001120
001121 GTGTTGCCCT CTCAGCAGCA AGAGTAAGGT GATGCCCCTG TCAGTTATAG TTCCTGAGTT CCTCTGTCTT TGATTCTTTG 001200
001201 CCTATTAGCC AGCTAGCTCA CCCTCTTGTT TATGCCACTG TTTTTTATCC TATTCATGCC TTCTCACAGA CAACTTTTCT 001280
001281 TACCTACAGC TTTGGACTCA TCCTTGTCTC CTTTCTGTTT CTTTTTCACT TTCCCTTCCC ATCACCAACT TTCTGGGTTT 001360
001361 TTTTCTGTTT CTTCTTAGAG TCCAGTGGCA GGGAGAAACT TGTCAGTCCA GTCTGTTGCC ATTTTTCCTG TTTGAGAAAG 001440
001441 ACTCACCAGC TTTTGGCTGG CTCACAGATT GGCTTTCCTT GGGTCAGGAC CCACCCTTTT CCCTGCCAGC TTTGGAAGCT 001520
001521 TGACAGAATT CGAGTGTGCA GTGGTGGTAA ATAAATAGTA AGGAACACAG AGCAGTCCTG GAGGCGTGCC TCCATCTGCT 001600
001601 GATGAGAAAA TCCAGTGCTG TCATCCAGCC CAGGTCCCAG CGGAATGGGC CTCTCTGTTC AGTAGGATCC CCCTCCTGCT 001680
001681 GAGTGGTTCA TGGCATGTTT CTGTTCAACG CTTTTCCATC TGTAGGATTC TTATTCTGTA tttatttgtt tttttgggtt 001760
001761 tttttatttt ttgagatgga gtctcgctct gtcgcccagg ctggagtgca gtggcacgac cccagctcgc tgcagcctct 001840
001841 gcctcccagg acgagggaga tcctcccacc tcagccttcc acgtagctgg gactacaggc atgcaccaca ggcatgcacc 001920
001921 accacgccag ctaatttttg tatttttggt agagacaggg ttgcatcatg ttgcccaggc tggtcttgaa tgcctgagct 002000
002001 caagcaatct atttgccttg gcctcccaaa gtgctgggat tacaggcatg agccaccacg gccagccTTC TCATTTGTTT 002080
002081 TTTTTATAAG GAAGCTATCT CTTCTTCCCT CCCCAACTAG GGTATTCTTT TTCCCTTTCG TCACTTTGCT CATGTACTGT 002160
002161 ATTCCTTCAA CTTCATTAAT GAATCCATTT GGAAGCAGTG AAAAAGGCAA CTCAGAAAGC TAAGAAGAAA TAGATAGAGG 002240
002241 AATACTCAGA GCTATCTGAG TATTTTCTTT AGTTTGTTAG CTCTTTGGAG CTTTGAAACT GGAAAGACCC AGGGAGTGAT 002320
002321 GTGGAGAAAG AGACTGAGCT TGTAAGACAC AGGAGCAGTG AGCTAAGGGA GATGGAGTAG TGGGGACAAA TTCTGGCACA 002400
002401 TTCTGTCTAC ACTCTGGGTA GATAGAGGAG GGAGGATGGA GCACCCATGG TGGGGGTATG TTGGTGACAG CATTTTCCCA 002480
002481 CCAGCCAGTG TAACAAGTGG CTGATTTGGG GGAAAGATGG CATAAACAAA TGAGAGAATG TGTTTACTAT TTGATGTAGA 002560
002561 TGGGTTATTT GCTTCATTTT TCAAATCAGT GTATATAATC AAGAATATTC AGCATGTTTG AATAGACTGT CAGAGCTGGA 002640
002641 ACTCTTTCAT TAACATCTCT GGCACCTTTA GTTTTAGCCC TGAACATTTT ATCTTAAAAT TAAACATTAC CAAATGCCTT 002720
002721 AGtttatttc atttattaaa tttatattct tatttgttat ttatatCAGC TTCCAATCAG AAGACTATAC AACCTCCTAG 002800
002801 GAATAACTGA AGTGAAGTGA TGGACTCCGA TTTGGAGAGT AGTAAGACGT GAAAGGAATA CACTTGTGTT TAAGCACCAT 002880
002881 GGCCTTGATG ATTCACTGTT GGGGAGAAGA AACAAGAAAA GTAACTGGTT GTCACCTATG AGACCCTTAC GTGATTGTTA 002960
002961 GTTAAGTTTT TATTCAAAGC AGCTGTAATT TAGTTAATAA AATAATTATG ATCTATGTTG TTTGCCCAAT TGAGATCCAG 003040
003041 TTTTTTGTTG TTATTTTTAA TCAATTAGGG GCAATAGTAG AATGGACAAT TTCCAAGAAT GATGCCTTTC AGGTCCTAGG 003120
003121 GCCTCTGGCC TCTAGGTAAC CAGTTTAAAT TGGTTCAGGG TGATAACTAC TTAGCACTGC CCTGGTGATT ACCCAGAGAT 003200
003201 ATCTATGAAA ACCAGTGGCT TCCATCAAAC CTTTGCCAAC TCAGGTTCAC AGCAGCTTTG GGCAGTTATG GCAGTATGGC 003280
003281 ATTAGCTGAG AGGTGTCTGC CACTTCTGGG TCAATGGAAT AATAAATTAA GTACAGGCAG GAATTTGGTT GGGAGCATCT 003360
003361 TGTATGATCT CCGTATGATG TGATATTGAT GGAGATAGTG GTCCTCATTC TTGGGGGTTG CCATTCCCAC ATTCCCCCTT 003440
003441 CAACAAACAG TGTAACAGGT CCTTCCCAGA TTTAGGGTAC TTTTATTGAT GGATATGTTT TCCTTTTATT CACATAACCC 003520
003521 CTTGAAACCC TGTCTTGTCC TCCTGTTACT TGCTTCTGCT GTACAAGATG TAGCACCTTT TCTCCTCTTT GAACATGGTC 003600
003601 TAGTGACACG GTAGCACCAG TTGCAGGAAG GAGCCAGACT TGTTCTCAGA GCACTGTGTT CACACTTTTC AGCAAAAATA 003680
003681 GCTATGGTTG TAACATATGT ATTCCCTTCC TCTGATTTGA AGGCAAAAAT CTACAGTGTT TCTTCACTTC TTTTCTGATC 003760
003761 TGGGGCATGA AAAAAGCAAG ATTGAAATTT GAACTATGAG TCTCCTGCAT GGCAACAAAA TGTGTGTCAC CATCAGGCCA 003840
003841 ACAGGCCAGC CCTTGAATGG GGATTTATTA CTGTTGTATC TATGTTGCAT GATAAACATT CATCACCTTC CTCCTGTAGT 003920
003921 CCTGCCTCGT ACTCCCCTTC CCCTATGATT GAAAAGTAAA CAAAACCCAC ATTTCCTATC CTGGTTAGAA GAAAATTAAT 004000
004001 GTTCTGACAG TTGTGATCGC CTGGAGTACT TTTAGACTTT TAGCATTCGT TTTTTACCTG TTTGTGGATG TGTGTTTGTA 004080
004081 TGTGCATACG TATGAGATAG GCACATGCAT CTTCTGTATG GACAAAGGTG GGGTACCTAC AGGAGAGCAA AGGTTAATTT 004160
004161 TGTGCTTTTA GTAAAAACAT TTAAATACAA AGTTCTTTAT TGGGTGGAAT TATATTTGAT GCAAATATTT GATCACTTAA 004240
004241 AACTTTTAAA ACTTCTAGGT AATTTGCCAC GCTTTTTGAC TGCTCACCAA TACCCTGTAA AAATACGTAA TTCTTCCTGT 004320
004321 TTGTGTAATA AGATATTCAT ATTTGTAGTT GCATTAATAA TAGTTATTTC TTAGTCCATC AGATGTTCCC GTGTGCCTCT 004400
004401 TTTATGCCAA ATTGATTGTC ATATTTCATG TTGGGACCAA GTAGTTTGCC CATGGCAAAC CTAAATTTAT GACCTGCTGA 004480
004481 GGCCTCTCAG AAAACTGAGC ATACTAGCAA GACAGCTCTT CTTGAAAAAA AAAatatgta tacacaaata tatacgtata 004560
004561 tctatatata cgtatgtata tacacacatg tatatTCTTC CTTGATTGTG TAGCTGTCCA AAATAATAAC ATATATAGAG 004640
004641 GGAGCTGTAT TCCTTTATAC AAATCTGATG GCTCCTGCAG CACTTTTTCC TTCTGAAAAT ATTTACATTT TGCTAACCTA 004720
004721 GTTTGTTACT TTAAAAATCA GTTTTGATGA AAGGAGGGAA AAGCAGATGG ACTTGAAAAA GATCCAAGCT CCTATTAGAA 004800
004801 AAGGTATGAA AATCTTTATA GTAAAATTTT TTATAAACTA AAGTTGTACC TTTTAATATG TAGTAAACTC TCATTTATTT 004880
004881 GGGGTTCGCT CTTGGATCTC ATCCATCCAT TGTGTTCTCT TTAATGCTGC CTGCCTTTTG AGGCATTCAC TGCCCTAGAC 004960
004961 AATGCCACCA GAGATAGTGG GGGAAATGCC AGATGAAACC AACTCTTGCT CTCACTAGTT GTCAGCTTCT CTGGATAAGT 005040
005041 GACCACAGAA GCAGGAGTCC TCCTGCTTGG GCATCATTGG GCCAGTTCCT TCTCTTTAAA TCAGATTTGT AATGGCTCCC 005120
005121 AAATTCCATC ACATCACATT TAAATTGCAG ACAGTGTTTT GCACATCATG TATCTGTTTT GTCCCATAAT ATGCTTTTTA 005200
005201 CTCCCTGATC CCAGTTTCTG CTGTTGACTC TTCCATTCAG TTTTATTTAT TGTGTGTTCT CACAGTGACA CCATTTGTCC 005280
005281 TTTTCTGCAA CAACCTTTCC AGCTACTTTT GCCAAATTCT ATTTGTCTTC TCCTTCAAAA CATTCTCCTT TGCAGTTCCT 005360
005361 CTTCATCTGT GTAGCTGCTC TTTTGTCTCT TAACTTACCA TTCCTATAGT ACTTTATGCA TCTCTGCTTA GTTCTATTAG 005440
005441 TTTTTTGGCC TTGCTCTTCT CCTTGATTTT AAAATTCCTT CTATAGCTAG AGCTTTTCTT TCTTTCATTC TCTCTTCCTG 005520
005521 CAGTGTTTTG CATACATCAG AAGCTAGGTA CATAAGTTAA ATGATTGAGA GTTGGCTGTA TTTAGATTTA TCACTTTTTA 005600
005601 ATAGGGTGAG CTTGAGAgtt ttctttcttt ctgttttttt tttttgtttt tttttttttt tttttttttt ttttttttGA 005680
005681 CTAATTTCAC ATGCTCTAAA AACCTTCAAA GGTGATTATT TTTCTCCTGG AAACTCCAGG TCCATTCTGT TTAAATCCCT 005760
005761 AAGAATGTCA GAATTAAAAT AACAGGGCTA TCCCGTAATT GGAAATATTT CTTTTTTCAG GATGCTATAG TCAATTTAGT 005840
005841 AAGTGACCAC CAAATTGTTA TTTGCACTAA CAAAGCTCAA AACACGATAA GTTTACTCCT CCATCTCAGT AATAAAAATT 005920
005921 AAGCTGTAAT CAACCTTCTA GGTTTCTCTT GTCTTAAAAT GGGTATTCAA AAATGGGGAT CTGTGGTGTA TGTATGGAAA 006000
006001 CACATACTCC TTAATTTACC TGTTGTTGGA AACTGGAGAA ATGATTGTCG GGCAACCGTT TATTTTTTAT TGTATTTTAT 006080
006081 TTGGTTGAGG GATTTTTTTA TAAACAGTTT TACTTGTGTC ATATTTTAAA ATTACTAACT GCCATCACCT GCTGGGGTCC 006160
006161 TTTGTTAGGT CATTTTCAGT GACTAATAGG GATAATCCAG GTAACTTTGA AGAGATGAGC AGTGAGTGAC CAGGCAGTTT 006240
006241 TTCTGCCTTT AGCTTTGACA GTTCTTAATT AAGATCATTG AAGACCAGCT TTCTCATAAA TTTCTCTTTT TGAAAAAAAG 006320
006321 AAAGCATTTG TACTAAGCTC CTCTGTAAGA CAACATCTTA AATCTTAAAA GTGTTGTTAT CATGACTGGT GAGAGAAGAA 006400
006401 AACATTTTGT TTTTATTAAA TGGAGCATTA TTTACAAAAA GCCATTGTTG AGAATTAGAT CCCACATCGT ATAAATATCT 006480
006481 ATTAACCATT CTAAATAAAG AGAACTCCAG TGTTGCTATG TGCAAGATCC TCTCTTGGAG CTTTTTTGCA TAGCAATTAA 006560
006561 AGGTGTGCTA TTTGTCAGTA GCCATTTTTT TGCAGTGATT TGAAGACCAA AGTTGTTTTA CAGCTGTGTT ACCGTTAAAG 006640
006641 GTTTTTTTTT TTATATGTAT TAAATCAATT TATCACTGTT TAAAGCTTTG AATATCTGCA ATCTTTGCCA AGGTACTTTT 006720
006721 TTATTTAAAA AAAAACATAA CTTTGTAAAT ATTACCCTGT AATATTATAT ATACTTAATA AAACATTTTA AGCTAT
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Predicted Small Protein

Name NONHSAT091077_smProtein_1694:1885
Length 64
Molecular weight 7369.4983
Aromaticity 0.206349206349
Instability index 70.7714285714
Isoelectric point 5.50994873047
Runs 12
Runs residual 0.0455134434726
Runs probability 0.0439778013307
Amino acid sequence MFLFNAFPSVGFLFCIYLFFWVFLFFEMESRSVAQAGVQWHDPSSLQPLPPRTREILPPQ
PST
Secondary structure LEEELLLLLHHHHHHHHHHHHHEEEEEELLLHHHHLLEEEELLLLLLLLLLLLLEELLLL
LLL
PRMN LLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLL
PiMo ooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iii