NONHSAT091004
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT091004 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1367 nt |
Genomic location |
chr3-:106613199..106614565 |
Exon number |
1 |
Exons |
106613199..106614565 |
Genome context |
|
Sequence |
000001 ATGCTAAAAA TTATTATCCC AACAATTATA TTACTCCCAA TAATGTGATG CTCTAAGAAC TCTACAATCT GAATTAATAC 000080
000081 AGCTTCCACA GTTTACTTAT CTGTCTCATC AGCCTGCTAT TCTTCAACCA ATTTAATGAT AACTCTTCAA CTTCTCATTA 000160 000161 ACTTTTTTTT GTTCTGATCC ACTGTCATCA CCCCTTCTAA TCCTAACAGC CTGGCTACTA TCCCTTATAA TTTTAGCAAG 000240 000241 CCAATATAAT CTATCCAAAG AATCGTTCCC AGGAAAAAAA ATTTTATATA TCAGTACTAG CAGGGATACA GATATTTTTA 000320 000321 ATTATAACAT TCACGGCCAC AGAACTAATC ATATTTTGTA TTATCTGTGA AGCCACACTA GCTCCCACCC TAATTATTAT 000400 000401 TACTGGTTGA GGTAATCAAG CAGAATGCCT GAAAGCAGGC TTGTACTTCT TATCTTATAC ACTGGTAGGA TCCTTACCTT 000480 000481 TACTTGTAGC ACTTATCTAT ACACAAAATG CCTCAGGCTC ACTAAATATG TTAATCACCA TATATACTAC TCAAGAAATA 000560 000561 ACAACTCTGG ATCTAACAAC CTTCTATGAC TAGCATGCAT CGTGGCATTT ATGGTAAAAA TGCCTCTCTA CAGACTCCAC 000640 000641 CTATGACTTG CTAAAGCCCA CATAGAAGCC CCCATTGCCG GCTCAATGGT ACTTGCAGCC GTATTCCTAA AATTAGGCAG 000720 000721 CTACGGAATG ATACAGGTCA CTCTAATCCT TAACCCCTTG ACAGAATTCA CAGCCTACCC TTCCTTATAA TATCCCTATG 000800 000801 AGAATAATTA TGACAAGCTC CATTTATCTA CGCCAAACTG ATCTAAAATC GCTCATTGCT TACTCCCCTG TAAACTACAT 000880 000881 GGCGCTTGTT ATTGTGGCTG TTCTCATTCA AACCCCTGAA GCTTTATAGG TGCAACCACC CCTATAATTG CCCACGGACT 000960 000961 AACTTTGTCC CTACTATTCC GCCTAGCAAA CTTGAACTAT GAATGAGTTC AGAGCCAAAC TATACTACTT ACTCAAGGCC 001040 001041 TTCAGACACT ACTCCCACTA ATGGCCATGT GATGACTTTT AGCTAGCCTC ACCAACCTTG CCCTACCCCC TACCATTAAT 001120 001121 TTAGTAGCGG AACTCTTCAT ATCCATAGCC TTATTCTCTT GATCCAATCT CACCATCATT CTTATGGGAC TTAACATGTT 001200 001201 AATCACAGCC CTCTACTTTC TGTACATACT AATCACCACA CAATGAGGGG TCTTCACGTA TCACATCAAC AATATTAAAC 001280 001281 CCTCTTTCAT TGTGAGAAAA ATACCCTAAT ATTAATACAC CTAGCACTGC TTCTCCTATT ATCCTTAAAC CCCCAAATCA 001360 001361 TTTGGGG |
Predicted Small Protein
Name | NONHSAT091004_smProtein_797:928 |
Length | 44 |
Molecular weight | 4840.8071 |
Aromaticity | 0.0697674418605 |
Instability index | 48.6604651163 |
Isoelectric point | 8.18853759766 |
Runs | 9 |
Runs residual | 0.0519989547949 |
Runs probability | 0.0594319810007 |
Amino acid sequence | MRIIMTSSIYLRQTDLKSLIAYSPVNYMALVIVAVLIQTPEAL |
Secondary structure | LEEEEELEEELLLLLHHHHHHHLLHHHHHHHHHHHHHLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooo |