NONHSAT090915

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT090915

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

522 nt

Genomic location

chr3+:101582412..101582933

Exon number

1

Exons

101582412..101582933

Genome context

Sequence
000001 ggctggtctc gaacttctgg tctcaactga tctgcccacc tcagcctccc aaagtgctgg gattacaggc atgagccatc 000080
000081 acgcccagcT GATTGTAGAT TCCTCTCAAA ATGTGTCTTG CTTTTTCCTT TGTACTCCTT GTCCTCTGGC CTGTTGTCCC 000160
000161 TGCTCTCTCC ATCACACCAT TCCCCTTGCC TGTCAGCTCA AGAGGGTTTG GGGGTGAGAT AGTGCAGCTG CTGAGTGCCC 000240
000241 TAGGTTCAAA GTTTCAGTct ttggtcgaca ttagtatctt atgtgaagct tgttaaacat gcaaatactt aggccccacc 000320
000321 ccaggtttcc tgaatcagaa tctccaggAT TTTCAGGGCT TCTGGCAGAT TATATGTGGT GATTCTAATG CAGTTTTAGT 000400
000401 CTAAATTAAT TAGGAAATGC AGACTTTGGA GAGTAGCTGT GGTTGGGCAG TAGCCATATG GTGGTAACAG AATGGGTTTC 000480
000481 TGGAATGCGT ATGGGGATGA AGTGGCAACT GATGAAGATG TG
[back to top]

Predicted Small Protein

Name NONHSAT090915_smProtein_110:295
Length 62
Molecular weight 6481.7468
Aromaticity 0.0983606557377
Instability index 61.5524590164
Isoelectric point 4.67694091797
Runs 7
Runs residual 0.0380629357452
Runs probability 0.0603250309133
Amino acid sequence MCLAFSFVLLVLWPVVPALSITPFPLPVSSRGFGGEIVQLLSALGSKFQSLVDISILCEA
C
Secondary structure LEEEEEEEEEEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLEEEEEEEEL
L
PRMN LLHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
L
PiMo TTTTTTTTTTTTTTTTTTTTTooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii
i