NONHSAT090915
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090915 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
522 nt |
Genomic location |
chr3+:101582412..101582933 |
Exon number |
1 |
Exons |
101582412..101582933 |
Genome context |
|
Sequence |
000001 ggctggtctc gaacttctgg tctcaactga tctgcccacc tcagcctccc aaagtgctgg gattacaggc atgagccatc 000080
000081 acgcccagcT GATTGTAGAT TCCTCTCAAA ATGTGTCTTG CTTTTTCCTT TGTACTCCTT GTCCTCTGGC CTGTTGTCCC 000160 000161 TGCTCTCTCC ATCACACCAT TCCCCTTGCC TGTCAGCTCA AGAGGGTTTG GGGGTGAGAT AGTGCAGCTG CTGAGTGCCC 000240 000241 TAGGTTCAAA GTTTCAGTct ttggtcgaca ttagtatctt atgtgaagct tgttaaacat gcaaatactt aggccccacc 000320 000321 ccaggtttcc tgaatcagaa tctccaggAT TTTCAGGGCT TCTGGCAGAT TATATGTGGT GATTCTAATG CAGTTTTAGT 000400 000401 CTAAATTAAT TAGGAAATGC AGACTTTGGA GAGTAGCTGT GGTTGGGCAG TAGCCATATG GTGGTAACAG AATGGGTTTC 000480 000481 TGGAATGCGT ATGGGGATGA AGTGGCAACT GATGAAGATG TG |
Predicted Small Protein
Name | NONHSAT090915_smProtein_110:295 |
Length | 62 |
Molecular weight | 6481.7468 |
Aromaticity | 0.0983606557377 |
Instability index | 61.5524590164 |
Isoelectric point | 4.67694091797 |
Runs | 7 |
Runs residual | 0.0380629357452 |
Runs probability | 0.0603250309133 |
Amino acid sequence | MCLAFSFVLLVLWPVVPALSITPFPLPVSSRGFGGEIVQLLSALGSKFQSLVDISILCEA C |
Secondary structure | LEEEEEEEEEEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHLLLLLLLEEEEEEEEL L |
PRMN | LLHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL L |
PiMo | TTTTTTTTTTTTTTTTTTTTTooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii i |