NONHSAT090426
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090426 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
677 nt |
Genomic location |
chr3+:72038675..72039587 |
Exon number |
2 |
Exons |
72038675..72038740,72038977..72039587 |
Genome context |
|
Sequence |
000001 tgcagatgta ctgcatgaac aagcaacctg ctgtgtttca ttgtgaagct gtggccagcc caattgAAGA GTCCTAAAGC 000080
000081 CATATGCCAG AAACCTTAAA GAACTTCTGC AAAATGTGAC GGTTCAAGAC AAGATTAAAG ACTGGCTTGA CCTGACTTCA 000160 000161 CAGAAACAAT GAATTCGGAA AGCAAACAGA GGAGTCTGCA TGAATGGAGT AAAATTATTA CTGTTATCAT TGTCATCATC 000240 000241 ATCTTCacag ctaacacttt ctctgagctt accatatgct gggcactctt ctatgcaccc tatatctagg ctcatagaat 000320 000321 cctcacgaca taaacccagg aggtcagcat tattaatatc tccattttat ggaggaagaa actgaggttc agcccagtca 000400 000401 agtaacttac cccaaatcac atagctagaa agtggtggaa ctgggacttg aacccaggca gtctagtttc agggccctgc 000480 000481 ccattaacat tactatCTTG CATGGTCTTT CTCCTTCATC TGAGTATCAG TGATTCAGAC ATGGATGAAT ACAGTCTCTG 000560 000561 AAAGAAACTT AGCCCATCTC AGTAATTTGC AAATATAGGC TATTCTCTGA ATAAATAAGA AAACAAAAAA GAATTTACTG 000640 000641 TTTGTGGCAA TGGAAAGGGG CCAATGTGAA AACAGCA |
Predicted Small Protein
Name | NONHSAT090426_smProtein_5:76 |
Length | 24 |
Molecular weight | 2584.9638 |
Aromaticity | 0.0869565217391 |
Instability index | 132.113043478 |
Isoelectric point | 4.74981689453 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0349231584526 |
Amino acid sequence | MYCMNKQPAVFHCEAVASPIEES |
Secondary structure | LEELLLLLLHHHHHHLLLLLLLL |
PRMN | - |
PiMo | - |