NONHSAT090409

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT090409

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1759 nt

Genomic location

chr3+:71633700..71635458

Exon number

1

Exons

71633700..71635458

Genome context

Sequence
000001 TTTGCCATCA GTGACAGTTG AAGGAGAGCG GGGTGGGAGG TGGTGTTTTC AACCCCCTTT CTCCCTCTCT CCCGTCCTCC 000080
000081 CTCGGTCTCT CCTCTTTCTT TCTGCACTTT GTCCAATGAA AGAAGGCGAG TTCGGGAGGT GAAAGTTCAG CAGAAGGACA 000160
000161 AACCCCTGTT TGCAAGGAAA CAGAAACCCC GCCAGCCAGC GAGGGGTTTT CTCCCCTGTT TCTCGGAATC AGGAGAGTGT 000240
000241 GAATGTGGGA CGAGCTTCTG CCCCCTTGTC AGAGCCACTG CAGGAATGTG CAATCGAGTC CACTTTGGGG GAAGGTGGCT 000320
000321 GCATCAGGAA CTGTGTTCTT GCCACGACTC CTCTTAGGAA AACGCCTGGG GGCTAGCATG TCAGTCCGTT GTTTAACACA 000400
000401 AATTACCTGC TCTCCCAGTG ATCAGTCACG TGCAAAAAGC TTTGTCCAAT TCTTTGAAAA GGTGAGATTT TTTTTTTTCT 000480
000481 TTTTGCGGTT TTTGAAGTTT GGTTGAATTT AGAAATTCGA AGGAATAAAC TAAGAGCCTG AATTAAATGT TTTGAAATAT 000560
000561 ACATACATAA AACAAAAGAC ACTAGTATTT CTTTCACTTT TATCAATACG CATAGAGAAG GAAGCAGAGT ATGTGTTTCC 000640
000641 AAAACGTGAC TTGGAAAGCT GTAAGACCTC TATGTCttgt tgttgttgtt gttgttgttg ttAACAGAAG TAAATTTTTT 000720
000721 CAGACCCACC ACCACAGAAG TGGCCAGACT CCCAAACCAG CATTTCCAGC TACTGGCTGG CTGGTGTACA CCAGGCCAAT 000800
000801 TCTTTATGAG AATATATTAA AAGTCACCCC TGTGGATTCC TACAAAGTAC TTCCCCTTGC GGGGAGGGGA GAGGCTTACT 000880
000881 GTCCCTTTGG TCTTGAGACC AGCACAGTTG TAGATAATAT CCTGAAAAGG TTATTATTAA ATTCTTTCGC GTAATGCCCC 000960
000961 TTTACAAATA TTGTTAAACA TTAATTTACA GAAGAACTTA AATCTTAATT TCAAGGGTGG CATAAGACTA TCGCTTTGAA 001040
001041 ATTGTATCTT TCGCAAGTTA AAAAAAAAAA ATAACAAAGC CATTCGCTGA TGCTACAGAA TAAAAGAAAG GGAGGCTGCT 001120
001121 AAGGTAATTT CAGCCTGGTA GAATTCACAT TGCATGCATG CTGCATAAAG TTCCATGCTA TCCAGATAAG ACTATTCACT 001200
001201 GAATCTTTTA GACTAGAATC TAGACCAATA AAATGCATTT TAGTTTGTAT GGAATGTCCT AGCTTCCTAG AGGCTAGGGT 001280
001281 TCGACGTCTT GTTTGTCAAG ACATAAAGGG Attaatgaca tacccactgt gtgctagacc acagagtggg cacagaggga 001360
001361 tgaaaaaata aaaattcctg cccttgagga gctcacagtc taAGCTGTCA ATaataacat ctaacattta ttaaatacta 001440
001441 tgatctaggc actgaactaa aagctttatg tcaactcagt taatactgcc aacaactctt tgaCATCACT GGAAATTCCA 001520
001521 TATGCTGAAT TCACACGGAA TTAAGTGGAA ATCTACAAAG TAGCCAGTCT ACTGGTTCTG TAGTGGTCAA CCTATTAAAA 001600
001601 ATGGTTTTTA ATTTCTAAAG TACTTTATGC CAAATATAAC ATGTTTATGG TATATGCCTG ACTGTAGAAT TATAACTCAG 001680
001681 GGGAATAACG ACTTATTTAA ATGTAACAGA TCTATTCATA GTCTGTAAAG AACAATTCAT CCTCTGATCT TGTTTTTCA
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Predicted Small Protein

Name NONHSAT090409_smProtein_242:505
Length 88
Molecular weight 9980.6686
Aromaticity 0.149425287356
Instability index 53.4298850575
Isoelectric point 10.2182006836
Runs 10
Runs residual 0.0233169129721
Runs probability 0.0194930224342
Amino acid sequence MWDELLPPCQSHCRNVQSSPLWGKVAASGTVFLPRLLLGKRLGASMSVRCLTQITCSPSD
QSRAKSFVQFFEKVRFFFFFLRFLKFG
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLEELLLLEEEHHHHHHLLLLLLEEEEEEEEEEEELLLL
HHHHHHHHHHHHHHHHHHHHHHHHHLL
PRMN -
PiMo -