NONHSAT090407

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT090407

Source

NONCODE4.0

Same with

,

Classification

intronic(S)

Length

3504 nt

Genomic location

chr3-:71619406..71623608

Exon number

2

Exons

71619406..71621981,71622646..71623608

Genome context

Sequence
000001 AAATGTTAAG GAGGCTTATT TAAATATTCA GGGCTTCAAC TAAAGATCTA ACCACTAAGA TCAAAAGAGT TATTTAAATA 000080
000081 AAAGTTGTTG AGACATTTTT TCATCTGTAT TAATAATGTG GCTTTTGAAG TTACCCGGTA ATAATGTGTC CATAATGCCC 000160
000161 ACACCTAATT TTTAATTTCC ATTTTGGCTT TAGGTGTGGC TTTATTTTAA TAGCTGCCAA AAAGTTGGCA ATTGTTTTTA 000240
000241 CGTTTAGAAC TTCACAGTTT GCTTTTCTGT AGGTTTAGGT AGCATTGGGG ATATTCGTCT AATAAAAACT TTTAAAATTT 000320
000321 CTGTTCTGAC CCTGAGGCAC TTAAAAAAAA CTCTTATGGG CCAAATTTTA AAAGTAGAGT GTCTCTACTA CTGCATAAAG 000400
000401 AATTTCTATA AAAGATGAAA CATGGAGCTG ATTGAAAGAA TAGACGGCGC AATGGTAGAG GACACATAGT TACCACTGTC 000480
000481 ACTGGTAATC TACAGCTTGA TGCGAAGTCA TTCCGCCTTG TTTGTTGAAA TGTTAATCAT TTCATTAAGA AAGGTTAAGT 000560
000561 AATTAACTGA TATTTCATTA GGGAATCAAT GACAGACCTT TTTTTAGTGA TGTATGGTAG ATATTTTCTA ATAGAAAGTT 000640
000641 TGCCCCATTT AATTATTTGG AAAGAAGCTA GTTGATTGAG CCTTGGGAAG GAGGGGTGGG GCATCTTCAG ATAACATCTA 000720
000721 TGTCCATAAG CAACTTTAAA TAATTTTGGA GAAAATGGTC TATTAGAATA GAAAATCGTT CAGTCCCCAG TTTTCTTTTA 000800
000801 TGGGCTCCAT CAGGCATGTT GTTGCAGACC TGCTGTTGTT TTGCATGCCT TCTCTGGGTT TAAGAAGGGT TCAGCTGCTT 000880
000881 AAATGTGTTC ATCTTATTTT CTAAATAATG GCTTTTGTTG CAGTGTGATG CATGTTGACA GTAAACGCGC AGCCGTAACT 000960
000961 TTGGCACAAA AAAGGAACAA AGAGTAAATC AGTGAGCACC CATGTACCTG TAGCCCGGCT TAAGAGAGAA GACGCTGCTG 001040
001041 GTTCAGGTAG GAGAGGCTCC TGGAATATCC CATCCTCATC TTACCTCTGT CCTTCTTTCC TAGAGGTTAC TTTACCACTG 001120
001121 TTCGCAGCTG GGTGGTTTTC ATCTTGTGTA GTTCTTCATA TTTTTAATAT GTATGCATGT ACAGGATTCC TCAAAATACA 001200
001201 GGATTTTGTT TTGCACGTTC AAGGTTTGTT CTGATAGCAT CCTACTATAT ATGTTTTTTA GTAACTTGCT TTTTTAAAAA 001280
001281 ATAAACAACA GTAAAATTCA TCCATGTGGA TACATGTAGC TATAGCTTAT TGATTTTTCC ATGTGAACCT TTTGAAATAC 001360
001361 TGGATATTAA TTCAAGACAA GTTCTTTAAA TTTGAGCCTA AAACCCAGTA GCACTCTGTA CATTGAAAAT TTCAGATTCA 001440
001441 TAAGAAACCA TCAGTCCTGA CTGGAACTTC ATAATTTGTT CATTTGTCTG TGTTTTGGGG GAAAAAACTT TAAAACCTCA 001520
001521 ACCATTTATC AGGGAATTTG ATTAAAAAAA ATAATCTATC AAGTGGCTGA TCTCTTACAT TAAGGGAAAA AACAGGCAAA 001600
001601 GCATTCATTT GAAGGAGCCT AGCCATTTTC TCTTTCTTAT TTAAAGACTT GGCTTGGAAC TTAGCAGTTA CATATGCAGG 001680
001681 GTAGCGAGTT AAAAAGCCAT GTTTAATTAA CAGGCGCTTT ATACTTCTGT ATCCTTGTTA TGATATAGCA CCTTGTTCTT 001760
001761 CAGTGTAGAA AGTGATTTCT GCATATTTTA AAGGACTGGC ATCTTTATGG TAAGAAAGCC ATATAAATAA AGATATACTT 001840
001841 AGATGAAAAT CGGAACATGT TTTTAAAATA GTGTGTGTCT ACTTTCATCT CTGTTATCAA ACTTGCTGCA TAAGCCAGAG 001920
001921 TTGATGCTCT GTGATTATGC TAATGACCAA AAGAATCGAT GATGCGAGAC TAGATGAAAT CAGTGGTATA ATCGGGGAAA 002000
002001 GTTATCAGTT TTTTTGTCAT TAAGTATTAG TGATAAATAA TACACTGTTC ATTTCGAGTG GATAGAACAT ATTTAATTCT 002080
002081 GATGTACAGA GTTTCATTTT AGTCAGGCTC ATTGCTGAGT AAAATGATCA TCTTTTGTAA TTTAAGAGGA AAGAGAAAAG 002160
002161 GCATTTTTGT CAGCCTGGCT AACTGACTTG GGCCATCTAG AAATGTTTAC CTTGACCAGC CAGGGAAGAT TGGAAAAACT 002240
002241 TAATTTTTTT TCCTCCTAGA CAACTTGCTT ATTTGTACTG ACATTTTATT AAGAATATCA GATACTCAGT AAATAGCATA 002320
002321 AATGACTAGA GATGTTAAAC AAAATGAGTA TAAAGGTAGA TAGTGTTTCC CTGAAGAATG GGGAAAATGA TAACAAAGGG 002400
002401 GCAATGTTTG GATAATGCTC TTTTTAAATG ACTAGTCTGC ATTAACCAGG GGCTATTAAA GTCGGTATCA CCCATTAGAC 002480
002481 AGCAGTTTTA ATTTTTTTTA ATTGAGTTTT TCATATCAAA TAAGATCATA CTTAGTAATG GTTTACTTAA AGAGAAGTAA 002560
002561 TACTTGTAAC TTAGAATCTT TTCCTGGGTT ACTAAAACCT TAAGGGAAAA CACTGATTCT ACCTTCCTTG TCAACAAAGC 002640
002641 GTTTCTAACA CAATTCTCTG TAACAGACAT TTCTCTGTGG ATAGAGTTTA GCACTTGTTT TACTACTGTA TGACAGTACC 002720
002721 TGGTGACAAG AGAGAAAATA AAAGAATAAT TAGCAATGTT CTGTAGGACA TGAAAAGTGA TTGAAGTCTA CGAGAGAAGG 002800
002801 AAATCAGATC GATGTTATTT TAAAAAAATG CATCACAAAA ATGATTCTCT TCAAAGCAAA GCCTCCTACC CAGGCTGGGG 002880
002881 CCAGCTGTGC TCTGCCATTT CCCTGCCACA GCCCTGTCCG TCCACGTTGG CTCTTACCAG CAGTACCATC TGCTGCTCCA 002960
002961 GCAGTGGCCT TCTCTATGGT AAGGCAGGCC AATTGGGTCA AATCTTGTGA TATGGCAGAT GTCCACTGAG AGCTAAGATT 003040
003041 GGGCCAGGCT CATTTTTATG TGTGTCCAAA GCCAAGATTT CAACTTGGTG AAAGGCTGTG GAATTTATTT CCCCAAGTGT 003120
003121 TGCCCAAACT CTGTTCTTTT CTTCAACTGC CTCCTTGGGC TGAGATGATT GCTTAATGCT CTTAATTATG CTGGATCCCT 003200
003201 CTGTATTTTC GAACACCTGT GGGTAATTCA GATCATGAGT GGTCACAGAG GCTGGCTCGA CAAACGGCTT CCCTTTCCGA 003280
003281 ATGGGAAAAT CCCAGGGAGC TGGACCATGC ACCGTGTGTC AGGGAGCTGA GTGGAGGCTG AAAGAGGATG GAACACTTCC 003360
003361 CTTGAACTTG AACTGGCATT GTGTTGTGTC CAAGTATCCT TCACCCTTGG ATTGGGGAGA GTCTTACAAT GAATAACTCA 003440
003441 GAAAAAAGTT TTCAAAATAA TCCTAGATTG TAAGATATCT ACGACCATTA TCCATAGCCA TATC
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Predicted Small Protein

Name NONHSAT090407_smProtein_2840:3028
Length 63
Molecular weight 6672.871
Aromaticity 0.0806451612903
Instability index 78.9822580645
Isoelectric point 9.49774169922
Runs 7
Runs residual 0.0407373271889
Runs probability 0.0403765109647
Amino acid sequence MILFKAKPPTQAGASCALPFPCHSPVRPRWLLPAVPSAAPAVAFSMVRQANWVKSCDMAD
VH
Secondary structure LEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHLHHHHHHHLL
LL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL
LL
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