NONHSAT090350

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT090350

Source

NONCODE4.0

Same with

,

Classification

sense

Length

804 nt

Genomic location

chr3-:69120244..69129519

Exon number

5

Exons

69120244..69120768,69124581..69124661,69126949..69127069,69129263..69129304,69129485..69129519

Genome context

Sequence
000001 GAGGCGGAGA ACAATATGGC GGATGGCGAG GAGCCGGAGA AGAAAAGAAG GAGAATAGAG GAGCTGCTGG CTGAGAAAAT 000080
000081 GGCTGTTGAT GGTGGGTGTG GGGACACTGG AGACTGGGAA GGTCGCTGGA ACCATGTAAA GAAGTTCCTC GAGCGATCTG 000160
000161 GACCCTTCAC ACACCCTGAT TTCGAACCGA GCACTGAATC TCTCCAGTTC TTGTTAGATA CATGTAAAGT TCTAGTCATT 000240
000241 GGAGCTGGCG GCTTAGGATG TGAGCTCCTG AAAAATCTGG CCTTGTCTGG TTTTAGACAG ATTCATGTTA TAGATATGGA 000320
000321 CACTATAGAT GTTTCCAATC TAAATAGGCA GTTTTTATTT AGGTAAGTTT TAATATCTTA GCGGTTTTCT TTTTTTAAGC 000400
000401 TCTGATAATC ATTTGAACTT GTACATTGCA GTTTAATAAT TTTTAAAAAT GACTTGAGAG GATAATACTA ATTTTATTTT 000480
000481 AAAAAACAAA AACTACCATT CCCATTGTAG GTAAAGTTTT GTAAGAAAAT TTTGGGCATC TTGGTGATAG TAGTTATGTA 000560
000561 AACAAATACA TGTTTTTGTT TTTTCGAAGA AGTCTCCTTC CAAAGGTTTA TGTGATTTTT GGGAATATCC TCAGGTTAAC 000640
000641 TGTGCTCTGA AGAAAGGAAA GAACGGTAGC TCTTCCTCCA GTTGATGTCA GAAGAGAATA CTCGCTGGAG TATTAGGCCC 000720
000721 TAGTGAGAGA TTGGCAGGGA TTTGTGAGCC AAGGTTTGAA TGGTGACTGG AGCAATAAAG TTGGGAAAGA GTTTGAGCTT 000800
000801 TTCC
[back to top]

Predicted Small Protein

Name NONHSAT090350_smProtein_569:649
Length 27
Molecular weight 3156.9132
Aromaticity 0.192307692308
Instability index 78.2384615385
Isoelectric point 11.7229614258
Runs 6
Runs residual 0.0214669051878
Runs probability 0.0455308249425
Amino acid sequence MFLFFRRSLLPKVYVIFGNILRLTVL
Secondary structure LEEEELLLLLLLEEEEHHHHHHHHLL
PRMN LLLLLLLLHHHHHHHHHHHHHHHHHH
PiMo i?????????????????????????