NONHSAT090350
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT090350 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
804 nt |
Genomic location |
chr3-:69120244..69129519 |
Exon number |
5 |
Exons |
69120244..69120768,69124581..69124661,69126949..69127069,69129263..69129304,69129485..69129519 |
Genome context |
|
Sequence |
000001 GAGGCGGAGA ACAATATGGC GGATGGCGAG GAGCCGGAGA AGAAAAGAAG GAGAATAGAG GAGCTGCTGG CTGAGAAAAT 000080
000081 GGCTGTTGAT GGTGGGTGTG GGGACACTGG AGACTGGGAA GGTCGCTGGA ACCATGTAAA GAAGTTCCTC GAGCGATCTG 000160 000161 GACCCTTCAC ACACCCTGAT TTCGAACCGA GCACTGAATC TCTCCAGTTC TTGTTAGATA CATGTAAAGT TCTAGTCATT 000240 000241 GGAGCTGGCG GCTTAGGATG TGAGCTCCTG AAAAATCTGG CCTTGTCTGG TTTTAGACAG ATTCATGTTA TAGATATGGA 000320 000321 CACTATAGAT GTTTCCAATC TAAATAGGCA GTTTTTATTT AGGTAAGTTT TAATATCTTA GCGGTTTTCT TTTTTTAAGC 000400 000401 TCTGATAATC ATTTGAACTT GTACATTGCA GTTTAATAAT TTTTAAAAAT GACTTGAGAG GATAATACTA ATTTTATTTT 000480 000481 AAAAAACAAA AACTACCATT CCCATTGTAG GTAAAGTTTT GTAAGAAAAT TTTGGGCATC TTGGTGATAG TAGTTATGTA 000560 000561 AACAAATACA TGTTTTTGTT TTTTCGAAGA AGTCTCCTTC CAAAGGTTTA TGTGATTTTT GGGAATATCC TCAGGTTAAC 000640 000641 TGTGCTCTGA AGAAAGGAAA GAACGGTAGC TCTTCCTCCA GTTGATGTCA GAAGAGAATA CTCGCTGGAG TATTAGGCCC 000720 000721 TAGTGAGAGA TTGGCAGGGA TTTGTGAGCC AAGGTTTGAA TGGTGACTGG AGCAATAAAG TTGGGAAAGA GTTTGAGCTT 000800 000801 TTCC |
Predicted Small Protein
Name | NONHSAT090350_smProtein_569:649 |
Length | 27 |
Molecular weight | 3156.9132 |
Aromaticity | 0.192307692308 |
Instability index | 78.2384615385 |
Isoelectric point | 11.7229614258 |
Runs | 6 |
Runs residual | 0.0214669051878 |
Runs probability | 0.0455308249425 |
Amino acid sequence | MFLFFRRSLLPKVYVIFGNILRLTVL |
Secondary structure | LEEEELLLLLLLEEEEHHHHHHHHLL |
PRMN | LLLLLLLLHHHHHHHHHHHHHHHHHH |
PiMo | i????????????????????????? |