NONHSAT088346
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT088346 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
541 nt |
Genomic location |
chr3+:14460378..14461632 |
Exon number |
3 |
Exons |
14460378..14460530,14461064..14461114,14461296..14461632 |
Genome context |
|
Sequence |
000001 atttgaacct gattgagctg actctagCCC ACTTCCTCAG GCTGGGAACG GCCTCTGGGC CCAGCCCCTT CCCCTTCCCC 000080
000081 CGGGACTTCC TCCTGGTTAA TGAGTAGTCA AAGCACCTGG GAAATGAGGC TCCTGCTGCC GTGAGGCTGG AATccctgcc 000160 000161 ggcttcgtga cctggaggag tcacagaact accctgagcc tcagGTGAGC CCCCCCTAGA GCAACTCCCC ACCCCCTCAG 000240 000241 CTATGGGGCT GAGTCCAGAA ATCAGATTCA CCCTCCCGGT GCCTGGGGCA GCTTAAGGAA GAAAGAAGAT TCTTAACAGG 000320 000321 GAGACCCTCT CTGGGCTTGT GGTGAGATCT CCCACGGGGT GTCTGCCCCC ATGCCCCGCA CCCATTGTAA ACTGGTGCAT 000400 000401 ATAGGAGTGT TGATATAACA GGCCCATGAC TTCCAGTGTT GTCAGAAAAG GCCACCTCAG GCCTGTTCAA CAGAAGTGCC 000480 000481 AACCTCAACA TTCGCTTCCT AGAAGGCTCA AGACCGTAAT AAAATGATAT TTATTATTTA C |
Predicted Small Protein
Name | NONHSAT088346_smProtein_425:526 |
Length | 34 |
Molecular weight | 3837.5726 |
Aromaticity | 0.0 |
Instability index | 60.5848484848 |
Isoelectric point | 12.0170288086 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0274863098393 |
Amino acid sequence | MTSSVVRKGHLRPVQQKCQPQHSLPRRLKTVIK |
Secondary structure | LLLLEELLLLLLLLLLLLLLLLLLLHHHHHLLL |
PRMN | - |
PiMo | - |