NONHSAT087871

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT087871

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1569 nt

Genomic location

chr3-:10055932..10068041

Exon number

3

Exons

10055932..10057210,10065244..10065431,10067725..10068041

Genome context

Sequence
000001 CCCATCGTTA TCACTCTTCG TAGACATGAT CCGCCACTAC GTGTCCATCC TGCTGGAGAG CGACAAGAAG CTCACCCAGG 000080
000081 AACAAGTATC TGACAGGGGA CGAGGCACCC ACAGTCCCTC TCCCATAAGC CTGCCAAGAA GATTGATGTG GCCCGTGTAA 000160
000161 CCTTTGACCT GTACAAGCTG AACCCACAGG ACTTCATTGG CTGCCTGAAC ATGAAGGCGA CTTTTTATGA TACGTACTCC 000240
000241 CTTTCCTATG ATCTGCACTG CTGTGGGGCC AAACGCATCA TGAAGAGCTC GAGGCTAATG GAGTCAAAGC AGCTGTGGTC 000320
000321 AGTGAACAGG AAAAGGCAGC CTTTGATGAG GCTGGGGGGC TGGGGAGGGA AGATTCCAAA CAGCAAAGGA GCTTGAGCCT 000400
000401 CAGTAGGGCC TGGCGATCCT AGTGGGAGAA TGGCCTTTCC TGGAGACCCC CCCGCACAGC CAGGAGCAGC TGTCGTCAAG 000480
000481 GTGGGCTGTG TCCCAGCCCC TCCAGCTCAG CCTTTTCATC TGTTCAGGCT GGTGCTCACG AGTGCACAGG ACGCCTTTCA 000560
000561 GAAGGAGGAT TCTAAATCCC GGGGGTCTGT AATGGCACAG CCACATGTCT GAGCCCAAAA CAAGAGAACC ACATGTGTTT 000640
000641 TTGCCACACT TCTTGCCAGT GCTGTCCATA TTTGTGTACA TAATTTTTTG TTTCTTTTCT TTGAGACAGA GTCTCACTCT 000720
000721 TGTCACCCAG GCTGGAGTGC AGTGGCACGA TCTCAGCTCA CTGCAACCTC TGCCTGCTGG GTTCAAGCAA TTCTTCTGCC 000800
000801 TCAGCCTCCC AAGTAGCTGG GATTACAGGC ACCCACCACC ACGCCCAGGT AATTTTTATA TTTTTCATAG AGATGGGGTT 000880
000881 TCGCCATATT GGCCAGGCTG GTCTCAAACT CCTGACCTCA GGTGATCCAC CTGCCTCAGC CTCCGAAAGT GCTGGGATTA 000960
000961 CAGGCGTGAG ACACCACACC CGGCTCTTGT GCACGTAATT CTATTTTATT TGAGATGGAG TCTTGCTCTG TTGCCCAGGC 001040
001041 TGGAGTGCAG TGGCATGATC TCGGCTCACT GCAACCTCCG CCTCTCAGGC TCAAGAGATT CTTGTGCCTC AGCCTTCCAG 001120
001121 GTAGCTGGGA CTGTGCACCA CCATGCTGGG CTAATGTTTG TATTTTTAGT AGAGTTGGGG TTTCACTTAG CCAGGCTGGT 001200
001201 CTCGAACTTC TGGCCTCAAA AGATCTGCCC GCCTCGGCTT CTCAAAGTGC CTTGGATTCC CAAAGTGCTG GGATTACAGG 001280
001281 TGTGAACCAT CATGCCTGGC CTGTGCACAT CATTTCAATA ACTGATATTT TGAAAACATT GTTTATTGAC ATAATTTATG 001360
001361 TACAATAAAA TGTATTATTT ACAAGTATGT CTTTCAATAA GTTTTGGCAA ATTTATACAG TTATGTAACC ACCATTTCTG 001440
001441 GCAAACCAGA AAGCTGCCAT CTGTCCCTTT ATAGTCATGT AAATAGACTT TTCTAAAATG TCATGTAAAT AGAATGATAT 001520
001521 ATCTTAAAAA TTTTTATTTC TATTTTTGTA AATTAAAAAA AGTATTTAG
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Predicted Small Protein

Name NONHSAT087871_smProtein_872:997
Length 42
Molecular weight 4244.8147
Aromaticity 0.0243902439024
Instability index 46.487804878
Isoelectric point 9.49383544922
Runs 9
Runs residual 0.0435433188688
Runs probability 0.02050089305
Amino acid sequence MGFRHIGQAGLKLLTSGDPPASASESAGITGVRHHTRLLCT
Secondary structure LLLEEEHHHHHEEELLLLLLLLLLLLLLLEEELLLLEEEEL
PRMN -
PiMo -