NONHSAT087810
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087810 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
814 nt |
Genomic location |
chr3+:9791702..9792756 |
Exon number |
2 |
Exons |
9791702..9792107,9792349..9792756 |
Genome context |
|
Sequence |
000001 GGGCGGGAGA AGATAAGTCG CAAGGAGGGG GCGGGACCTA CACCTCAGGA AAGCCGGAGA ATTGGGGCAC GAAGCGGGGC 000080
000081 TTTGATGACC CGCAAAGGGC GAGGCATGCA GGAGGTGGAG GAATTAAGTG AAACAGGGAA GGTTGTTAAA CAGCACCGTG 000160 000161 TGGGCGAGGC CTTAAGGGTC GTGGTCCTTG TCTGGGCGGG GTCTTTGGGC GTCGACGAGG CCTGGTTCTG GGTAGGCGGG 000240 000241 GCTACTACGG GGCGGTGCCT GCTGTGGAAA TGCCTGCCCG CGCGCTTCTG CCCAGGCGCA TGGGGCATCG TACTCTAGCC 000320 000321 TCCACTCCTG CCCTGTGGGC CTCCATCCCG TGCCCTCGCT CTGAGCTGCG CCTGGACCTG GTTCTGCCTT CTGGACAATC 000400 000401 TTTCCGggtc tcgctctgtt gcccaggtag gaatgcagag aggcccattc cagcctcgac cccccgggcg cagcctcccg 000480 000481 agtagctggg actacaggtg tgcgccatgc ccggttaaat ttttgtattt tttgtagagg tgaggtttcg ccatgttgct 000560 000561 cagactggAA GATAGCACTG TTACTTGTAT TAGTTTCGTA CATGGAGCTA TTGTAGGATA GGAGGGACCC CAAAGGGTGC 000640 000641 AAGAAAGGAA ATTGAGTGCC AGGGTTGTCA TGTGCCTTGG GCTCAGGTGG AGGGAGCAAA GTCCTGCACA CTGGAGTGGT 000720 000721 GTACTAGCGG ATCAAGTATG GACACTGACT CAGACTGAGG AGCAGCTCCA CTGCACTGTG TACCGAGGAG ACAAGAGCCA 000800 000801 GGCTAGCAGG CCCA |
Predicted Small Protein
Name | NONHSAT087810_smProtein_269:484 |
Length | 72 |
Molecular weight | 7756.0143 |
Aromaticity | 0.0281690140845 |
Instability index | 72.1028169014 |
Isoelectric point | 11.401184082 |
Runs | 9 |
Runs residual | 0.0217939214233 |
Runs probability | 0.0413452668355 |
Amino acid sequence | MPARALLPRRMGHRTLASTPALWASIPCPRSELRLDLVLPSGQSFRVSLCCPGRNAERPI PASTPRAQPPE |
Secondary structure | LLLLLLLLLLLLLLLLLLLHHHHLLLLLLLLLLEELEELLLLLEEEEEEELLLLLLLLLL LLLLLLLLLLL |
PRMN | - |
PiMo | - |