NONHSAT087789

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087789

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2606 nt

Genomic location

chr3-:9433389..9438342

Exon number

2

Exons

9433389..9433510,9435859..9438342

Genome context

Sequence
000001 GGGGGCGGGC TGCCGGCCGA GACTTCTGGA TGGCGGCGGC CGCGGCTCCG CCCCGGGTTC CCACCGCCTG AAGGGCGAGA 000080
000081 CAAGCCCGAC CTGCTACAGG CACTCGTGGG GGTGGGGGAG GAGCGGGGGT CGGTCCGGCT GGTTTGTGGG TGGGAGGCGC 000160
000161 TTGTTCTCCA AAAACCGGCG CGAGCTGCAA TCCTGAGGGA GCTGCGGTGG AGGAGGTGGA GAGAAGGCCG CACCCTTCTG 000240
000241 GGCAGGGGGA GGGGAGTGCC GCAATACCTT TATGGGAGTT CTCTGCTGCC TCCCGTCTTG TAAGGACCGC CCTGGGCCTG 000320
000321 GAAGAAGCCC TCCCTCCTTT CCTCCTCGCG TGATCTCGTC ATCGCCTCCA TGTCGAGTCG CTTCTCGATT ATGGGCGGGA 000400
000401 TTCTTTTGCC TAGGCTTAAG GGGCTAACTT GGTCCCTGGG CGTTGCCCTG CAGGGGAGTG AGCAGCTGTA AGATTTGAGG 000480
000481 GGCGACTCCG ATTAGTTTAT CTTCCCACGG ACTAGAGTTG GTGTCGAGGT TATTGTAATA AGGGTGGGGT AGGGAAATGG 000560
000561 AGCTTAGTCA TTCACCTGGG GCTGATTTTA TGCAACGAGA CTGCGGATTA TCACTACTTA TCATTTTTGG AGCATTTTTC 000640
000641 TAGAGACAGA CATAAAGCAT GATCACCTGA GTTTTATACC ATTTGAGACC CTTGCTGCAC CACCAAAGTG TAGCATCAGG 000720
000721 TTAAATCTTA ATAGAAAAAT TTTAGCTTTT GCTTGAGAAA CCAGTGCTTC CCTCCCTCAC CCTCTCTCCC CAGGCTCTCT 000800
000801 ACCCCTTTGC ATCCCTACCA GGCATCTTAG CAACTCTCAC TCATACTTGA TCCCATTTTC CATTTGTTGT ACTTGCTCCT 000880
000881 CTAGTATTCA GACATAGCAC TAGCTTTCTC CCTCTCTTGA TCTTGGGTAG CCTGGTGTCT CGCGAAACCA GACAGATTGG 000960
000961 TTCCACCACA AATTAAGGCT TGAGCTGGGG CTTGACTCTT ACCCAGCAGT GCTTTTATTC CTCCCTAGTT CACGTTCTTA 001040
001041 AATGTTTATC TTGATTTTCA TTTTATCCTT TTTCCTTAGC TGGGATTCTG TCCCTGACCG TCTTCACAGT CCAGGTGATC 001120
001121 TTGACTACTG CTTTACAGAG AATTGGATCT GAGGTTAGGC AACATCTCCC TTTTTCTTCC TCTAAATACC TCTCATTTCT 001200
001201 GTTCTTACCA GTTAGTAACT GATCTCAGAT GCCTGTGTGA TAGCTTCCAA ATTGCTGTCT CTGTCTTTAG TGTTATCTTT 001280
001281 TGATCCATCT TACATCTTGT TAGGATGATT GTCCTAAAGG AAGATAGAGC ATGAAAATGA CAGGTGAAAC TCCATTACTG 001360
001361 GCTTGTACTG TTTACAGCAA GTTGTCTAAC CCGCGGGCCG CATGGGACCC AGGACAGCTT TGAATGCGAC CCAACACAAA 001440
001441 TTCGTAAACT TTCTTAAAGT TTTAGGAGTT TTTTTTGCGG GGTGTTTTTT TTGTTGTTGT TGTCTGTTTT TTTTTTTTGC 001520
001521 TCATCAGCTG TCCTTTATAT GTGGCCCAAG ACAGTTCTTG CAGTGTGGCC CAGGGAAGCC GAAAGATTGG ACACCCCTGG 001600
001601 TTTACAGGAT GAATTCTGTT CTCGTGAATG TGATGCATAA GGTCCCTGGA TAGACTTTCC TCAATTTAAC AGCTTTTTCA 001680
001681 TTTTTCACTA TTTTCCACAT ACTACACACA CAAATATGAC CTCTCTCCTG AAGTCACATG GAATGAATTG CAGTTACCCA 001760
001761 AATCATAGAG ACGTCATATA TCTTTGTGGG GTGGTTCTTT TTGGAATGCT ACCCTTGCTG CTTTTAATCC TGCAGATTCA 001840
001841 AATGTCATCT CCCCTTTGGT CATGCCTTCC ATGGTCTGTT GTTCTATGAC CCAAACTGCC CTTTTAAAAA AGCAGTTTTC 001920
001921 TTCTGACTCC TGAGCAGTTT GTACTGCGTG GGTCATAGTA ATTCTGGGGT TGTTGTCATT GCTGATTTAA ATTACCTTAA 002000
002001 CTATTCTGAG CTTTTTGAAG GAATAGTGTC TTGTACTCCT GAGCTCCTAG TATACTCTGA TGTCTAGCCA ACTTTAAGTA 002080
002081 AATGGAGTGA GCGACATGTA AATGTCTTTA TGGTTTGACA TTTTATTAAT CTTGAGCATT GGAAAAGTGG CTGGTATGAC 002160
002161 TAAAGAACTG AATTTTTATT TTTTATCTAA TTTGAATTGC AACTGTGGAC AGTATAGCTG TAGCCCCGGA CTTGTTCTGT 002240
002241 GGATTACAGA ATACGTGGAC ATTGATGGTT TTCTCTTTTT ACTGAGCAGT AAGGAAATAA AAGCTGAAGC TCTCTGGCCC 002320
002321 ATTACATTTC ATTTAACTGC TTGTTTTGTT TTATTTATTA TATATTTAGC TGAAAGCTAA GTCCAACAAA CCATTTTTAA 002400
002401 AGATGTGCCT GCCTTGGACA ACAGTGAAAG CAAGCGTTAA TGAGTTTGGA TTTCAAAAAA AAATGCATAA TGAATTTTAG 002480
002481 GGAGGTGTGG AAACAGGAAG AGAACTAGAA CTGGAAGTAA AGCATTGAAG ATGTGACTGA ATTGCTGCAA TCTCATGATC 002560
002561 AAATTTGAAT GGATGAGGAG TTGCTTTTTA GGGATGAGCA AAGAAA
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Predicted Small Protein

Name NONHSAT087789_smProtein_1715:1888
Length 58
Molecular weight 6432.7919
Aromaticity 0.0877192982456
Instability index 55.0701754386
Isoelectric point 7.76068115234
Runs 8
Runs residual 0.0135964912281
Runs probability 0.035726903374
Amino acid sequence MTSLLKSHGMNCSYPNHRDVIYLCGVVLFGMLPLLLLILQIQMSSPLWSCLPWSVVL
Secondary structure LHHHHHHLLLLLLLLLLLLEEEEEHHHHHHHHHHHHHHHHHHHLLLLLLLLLLEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
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