NONHSAT087547
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT087547 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
857 nt |
Genomic location |
chr22+:51222225..51227781 |
Exon number |
4 |
Exons |
51222225..51222449,51223601..51223721,51227178..51227226,51227320..51227781 |
Genome context |
|
Sequence |
000001 GGGGCTCCTG GCTGTGGGTG TGGTACCGAG GCTTCAGCGG GTGCCGCCCG CCTAGAGGGA GTGGAGCGGT GAGCACGTCA 000080
000081 GGGGTGGGGG GCGCAGGTCA AGCTTTCACC AGTTTTTAAT TCTTTGATGG GGTAAATTTG AGCAATTTTC TCGACTTGTC 000160 000161 GACATTCGTT ATTAACTGAG CAGGAATCAG GAGAGGAACC CGGTCCTCTC CACACAGCCC AGCAGAGAGC CTACGACTAG 000240 000241 ATTTGCATCT TTACGTCCTG CGCGGAGGCT GCTACACACA TGCAGAAGTC ATGCTGGTGG CCTGGACAGT GAAGGGAGAG 000320 000321 AAGTGGATTT GGGAGACATT TAGGAGGAAC AGTAAGAGGA CCTTGTGCAT GAATAATTTG TTTCCACACT ACAGACAGAA 000400 000401 GAATCCCAGA CTTCTTAGAG AACCCAGTGA CTTTTTGCAC CTTAAATCTG TGAAATCCTC ATGTTTTCTT CTGCCGTATC 000480 000481 CATAGTTCAA ACAAAGATGA GGCAAAGCTA GATGCATTCC TGAAGGAACC CAAGAAATTC CTCTCTTTAT TTCTCTGGAA 000560 000561 TGAAATGAAT TCTCTAGACC ACCAGTTCTA ACCTTCAAAA ACCAAACCTG TTTGTGAGAT CTCCTTCAAA TACTACTGTA 000640 000641 GACCCCAGTG TTTATTCATT AAATTTTTAA AATATTTGTT TTATTTGGAA TCCATGTATT TGTAATTTTA GTGTTTGTAT 000720 000721 TAATATAAGG GAGAAATGTT TAAATCTGTC TATGCCATAT GTGCCTCTGG CTTATTGCCC AATTAATTGT AGACTCAGGC 000800 000801 TAAACTTTGG TTTCTGTCTT TAATTTTTGT CAGAAGAAAT ATAACTGATC TCAAAAC |
Predicted Small Protein
Name | NONHSAT087547_smProtein_290:484 |
Length | 65 |
Molecular weight | 7809.1324 |
Aromaticity | 0.140625 |
Instability index | 55.2625 |
Isoelectric point | 10.2251586914 |
Runs | 11 |
Runs residual | 0.02328125 |
Runs probability | 0.0285204991087 |
Amino acid sequence | MLVAWTVKGEKWIWETFRRNSKRTLCMNNLFPHYRQKNPRLLREPSDFLHLKSVKSSCFL LPYP |
Secondary structure | LEEEEEELLLHHHHHHHHHLLLLEEELLLLLLLLLLLLLLLLLLLLLLEEELLLLLLEEE LLLL |
PRMN | - |
PiMo | - |