NONHSAT087454

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087454

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2933 nt

Genomic location

chr22-:50602498..50605670

Exon number

3

Exons

50602498..50604475,50604596..50604619,50604740..50605670

Genome context

Sequence
000001 ctgacctcat gatctgccca cctcagcctc ccaaagtgct gggattacag gcatgagcca ccacacccag cAAtttttac 000080
000081 tattatcttt tgagacaagg tctcactctg ttgcccaacc tggagtgcag cggtgggatc ttggcttact gcatcctcca 000160
000161 tctcctgggc tcaagggatc ctcccacctc agcctcctga gtagctggga ctgcagacat gcaccaccac acctggctaa 000240
000241 tttttttgag agatggggtt tcgccatgtt gcctaggttg gtctcgaatt cctgggctca agtgatcctc ctgcctcagc 000320
000321 ctcccaaagt gttgggatta caggcataag ccactgcacc tggccttaaa atttttttat ctgtagaaac ggggtctcac 000400
000401 tatattgccc aggatggtct caaactcctg atccccccac ccccacccaa cccagccttg gcctcccaca gtgctgggat 000480
000481 tgcaggcatg ggATTACAGG TGTGAGCCAC GCTGGGACTG CAGGCATGAG CCATGCTGGG ATTGCAGGCG TGAGCCACGC 000560
000561 TGGGATTGCA GGCGTGAGCC ACGCTGGGAT TGCAGGCGTG AGCCACGCTG GGATTGCAGG TGTGAGCCAC GCTGGGATTG 000640
000641 CAGGCTTGAG CCACGCTGGG ATTGGAGACG TGGGCCACGC TGGGATTGGA GACGTGGGCC ACGCTGGGAT TGGAGACGTG 000720
000721 GGCCACGCTG GGACTGGAGA CGTGGGCCAC GCTGGGATTG CAGGCTTGAG CCACGCTGGG ACTGGAGATG TGGGCCACGC 000800
000801 TGGGACTGCA GGCGTGGGCC ACGCTGGGAC TGCAGGCGTG GGCCACGCTG GGACTGCAGG CGTGAGCCAC GCTGGGATTG 000880
000881 CAGGCGTGGG CCACGCTGGG ATTGCAGGCT TGAGCCACGC TGGGATTGCA GGCTTGAGCC ACGCTGGGAT TGCAGGCTTG 000960
000961 AGCCACGCTG GGATTGCAGG CGTGAGCCAC GCTGGGATTG CAGGCGTGGG CCACGCTGGG ATTGCAGGCT TGAGCCACGC 001040
001041 TGGGATTGGA GACGTGGGCC ATGCTGGGAT TGCAGGAGCC ATGCTGGGAT TGCAGGCGTG GGCCACGCTG GGATTGCAGG 001120
001121 CTTGGGCCAC GCTGGGACTG GAGACGTGGA CCATGCTGGG ATTGCAGGCG TGAGCCACGC TGGGACTGCA GGCTTGGGCC 001200
001201 ACTGCACCTA CTGCATTTGT TTTGCATGTT ACGCCCCTGC CTGGGGCAGC ATCTGGGCCA CAGCACCTTT TCAGTGAACA 001280
001281 ACGATGGTTA TGAGTGGGTG TGATCTTGCC TGCCTGTTGA GCACCACTGG CCAGTCACTG TCTCGCAGAG GAAGCGGTGG 001360
001361 GAGCTTGACA AGAAGAACGC CTGTGGCAGA GCCAGGGCCT GGACTCAAAA CTCGGCAACT TGGCTGCCAT CCTCATTCCC 001440
001441 GGTGAGTGGA ACGGTGAGCA AAGGTCCATG ATGACACCCT GGCCGCCCAG CCTGTTACCC TCCTCAGGAG GATGTGTGGC 001520
001521 AGGAGTGAAG GGTCCACCCC TGCGGTCTTC ACACTCCAGT GGCCCAGACT GGAGGACAGT CTTCCCAAAT CCCGTATTAT 001600
001601 GGGAGCAGCT GCTTCTTTCt cttggtgata cattaacatg agatttcaac acatggaagg atcttgaaga cgatgcgtgc 001680
001681 tgtgcaaagc ttgtattccc atctctctct ttaagcgaac aagctttctg agcttctata tccatgaaga tgaaaaacag 001760
001761 gaaaaaaaac tgacaacctg tctcatttcc gccctaagta atatcttccc atgatgacat taactatttg caaataagcc 001840
001841 ccatacggat aataatgcat ttctggccag gtgtggtggc tcacgcctat aatcccagca ctttgggagg ctgaggtggg 001920
001921 cagatcactt gaggtcagga gttcaagacc agcctggcca acatgatgaa accacgtctc gactaaaaat acaaaaatta 002000
002001 gccaggcatg gtggcatatg cctgtaatcc cagctactca ggaggctgag gcaggggaat cgcttgaatc caggaggcgg 002080
002081 aggttgcagt gagccaagat tgcaccactg ccctccagcc tgggcgacag aatgaaactc catctcaaaa aaaaaaaagc 002160
002161 atttctagct caattttatt tttgtttatt atgaaaattg gaaatgtatg cgtatcattt tgattgggta tttataataa 002240
002241 tcgtaagaat aacaatcGGC CAGATTGTTC CCATGTTAAG CCTCAGTGCT TGTATTTTGT CAGGGTGCGC TGAGACTGGT 002320
002321 GTTTGGTAGG GACAGGCCAG ACCATGCCAC AGTAATAGAC GTCAACAACA GCCCAGGTTG TTTGGCCCCA CACACTGCTC 002400
002401 ACAGGGAGAC TGGGGGCTCT GTCCCGCCAT CCTCAGCCTG ACACGTGGCG GCCCTCGCCC CCGGTGTCCG GTGGGGAGTG 002480
002481 GGGGGTGAGC TGCCCTCTGC CTTCAGAGCC TTCGCATCAG CGATGTCACT GGCTTTACAC ACCTGTGGTG GTGAGGGAGG 002560
002561 TGGGGGTGAA ATCCCGTTCT GTGCCCAGGA GAGGAACAGA AAATATTTGT GATGCCCACA Cctttcaaac ctaacacatt 002640
002641 ttgcattagg atacaaatat gggggggagt ggaatagaaa tatgagttca aggaaaagaa gaaataaact ttctagctgt 002720
002721 gaaagaacag cttgctggtg tcctctaagt ggatgatggt atcaaactgt aatggcattt tttgttgcac tggatacact 002800
002801 gaaaaggaaa atggcaagat ttgggccggg cgtggtggct catgcctgta accccagcac tttgggaggc cgaggcaggt 002880
002881 ggatcaccag gtcaggagat ggagaccatc ctggctaaca cggtgaaacc ccg
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Predicted Small Protein

Name NONHSAT087454_smProtein_1283:1444
Length 54
Molecular weight 5522.3137
Aromaticity 0.0
Instability index 84.8660377358
Isoelectric point 10.6427612305
Runs 8
Runs residual 0.00931891394386
Runs probability 0.0459503621269
Amino acid sequence MVMSGCDLACLLSTTGQSLSRRGSGGSLTRRTPVAEPGPGLKTRQLGCHPHSR
Secondary structure LLLLLHHHHEEELLLLLLLLLLLLLLLEEELLLLLLLLLLLLLLEELLLLLLL
PRMN -
PiMo -