NONHSAT087037

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087037

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

5423 nt

Genomic location

chr22-:42660336..42665758

Exon number

1

Exons

42660336..42665758

Genome context

Sequence
000001 CGGAGGGCAG GTACCGGCGG GTTGGGCGCA AGGTCCCGGC GCAGGACACA CTTCCTGTGT GGGGCGGCCT CTCCTCCCGC 000080
000081 GCCGCGGGGA ACAGGGCGGG GTGTGCAAGC CGGGGTCTCT GGGCGAGGGA GCGCTCGTTT GGGGACCTGA GGCTTTCGTC 000160
000161 CCTTTTTCGG GGGAAAGTGG TGGTTTGAAG GAGCGTGGCC AATCGGGCCG ATCCCTCTCA GGCTACGGCG GGAGGTGCAC 000240
000241 TGTCCTCTGG ACGCCGGAAT GGGAGTGGAA TTTAGTGAGT TGGGGGGCGG TGCCGAGGAG CGGCCGTCTT CCTCTGCTTG 000320
000321 TGGGTGGGAT TATTGTCTGT TTTTGTGGTT GCGGATACCA ATACGGTCTG CTGGTCTGTA TTCAATCCTT TAGTTTGACC 000400
000401 TTAGGGGTCA GGTCAAAATT AGGATTTCCC CCTTTTCCTT TTTGCTTTTT TTTCCTCGAA GATTAGATGT CTCTGGTAAC 000480
000481 TGCTGTAAAA TGGATGGAAT TTTCGAGCTA TTATCTAACA GGCTGATCTT TGAATGATAA TTGGACCCTT ATGTTAACAG 000560
000561 CCTCAGTGAA GAGTGAAGAG TTTTATACAG CATCTTCCGT GGGGTggcag ttaggtggat ggggaagcta cactgaattc 000640
000641 cgacctggga gaccaggaat ctgcttacag ctttgacgcc aaataaactg cagcccaggg caagttactt tccctggtaa 000720
000721 ttttctcatc tgttaagtga ggaCTCCCGG GTCAGACGGT ACAGGGGTTT GTGGTTTTGC TTTTTTATCT CTCATTTTGT 000800
000801 GCTCTGTTTT AGCCATAGGC AACTTTTCTG AGAAATGCAG ACTGTACCTT AGCTGGCTTT TAAAAGCCTG TCTTTAAGCT 000880
000881 TCCAGCCTCT GCCTTCAACA GAGCATAAAA GTTGGTCAGG GTACGCTCTT TTTTGAAATC CCACTTGCTG TTCTGTGCTT 000960
000961 CAGATCAGAA AGTGTATTAT TCTGACCTAG GTGGAATGCA CCTTAACATA TTTTTTGTCT TTGTGAAAGA AGTTATCAGA 001040
001041 AAATGTTTCA GAGAATATTT GTCTACTTGG AAAATGTGTG GATAACATGT GATTGGGTCT GTGTATGTTG GCTCAGAGGA 001120
001121 GTTCCAAGAT CTTTCTACGC AGGGGATTTT GGAGGATCCA GATTTTATTA AAGTTCTTCA AAGGACATTT GACATTTGGC 001200
001201 TAACTGTTGA AATTTCCAGC CAGTTTCAGC ATTCTCAGAG TAGGGGGATG AAGTAGAATG CCATAACATC TCCTGTGAAA 001280
001281 TGGTATGCTA GTGGAATTAA CTGTCACCTC AGGGTGCACT GATTATCTGC ATCCCCAACT TTCTCCTTAC TGGTAGCCAG 001360
001361 TGCTCCGCAG ATGCTGAAGA ACCGCAATTA GTTTCACTGA TTTTATGGTG TGTGAAGGCC TTAGGCTGTG CTTTTGACTG 001440
001441 GTAAGTATTT CTATACCAAC CTCAGAATTT GTCTTAAATT TCTAGAACTG TGCTGCTGGG CCGGATATGA GCCCAATATG 001520
001521 TTACAATATG TCTTTCTCAG ATCACttttt atttttatat attatttaat ttttaaaatt aaatCCCCtt ttatttactt 001600
001601 atttattttg acacagtgtt gttctgttgt ccaggctgga gtgcagtggc acgatctcag ctcactgcag cctctacctc 001680
001681 ccagtttcag gtgattctcc tgcgtcagcc tcccgagtag ctgggattag aggcatacac taccacaccc ggctaatttt 001760
001761 tgtattttaa gtagagacaa catttcgcca tgttagccag gctggtcttg aactcctgac ctcaggtgat ccgcctgcct 001840
001841 tgacttccca aagtgctggg attacaggtg tgaaccactg cgcctggGCT AGATCACTTT TTGATTCAGT CTCTTTGAAC 001920
001921 AGTTTCCAAA AGGATCCCAG CATAGGGGCA GAGTGCTTAT AATTATTGAC TTCGGAGACA GTTTGGTAGT AATTTTCTTG 002000
002001 TATGTTACCA TCAGGCCTAT CACACAAGTA AACACttttt tgtttgtttt tttgagacag agtctctctc tgttgccagg 002080
002081 ctggagtgca gtggcactat ctcggcccac tgtaacctcc gcctcccggg ttcaagcaat tctcccacct cagcctcctg 002160
002161 agtagctggg actacaggtg cgcaccacca cgcccagcta atttttgtat ttttagtaga gatgggattt caccatattg 002240
002241 ggcaggatgg tctcaatctc ttgacctcat gatccacccg ccttgggccc ccaaagtgct gggattacag gtatgagcca 002320
002321 ccatgcccag ccCACAAGTA GACACTTTTA TATAGCCACA CAGATTATTT GTGATTTTCT AGAATAAACA GTTTGTTAGG 002400
002401 ATTTGAATTA TGACCTTGCG TTCAGTGTGG TGTTTAAAAA AACTCCGATT ACTCAAATTG Gttttgtttt ttctgttgtt 002480
002481 gttttgagat ggagtctcgc tcttgttgcc cagctgggag tgcagtggtg cgatcttggc tcactgcaac ctcagcctcc 002560
002561 agggttcaag cgagtctcct gcctcagcct cccgagtagc taggattaca ggcatgcgcc acctcgcctg gctaattttg 002640
002641 tattttcagt agagacggga tttctccatg ttggtcaggc tggtctcaaa ctcgacctca ggtgagccgc ctgcctcagc 002720
002721 ctcccaaagt gctgggatta caggcatgag ccaccgtgcc cggccTATTA AATTGTAAGC AGTTATCATG CTCACATGTA 002800
002801 TATTACACTT GTCTTATAAA ACTTACAAGG GAAAAAATTG TTATAAAATT TTCATTCTAC AAAGTAATTT GTGTGTATTC 002880
002881 ACGTGAGAGG TTGCCAAAGT TGGTAAGATA TCGGGAGACA TGGCTTTTAG GTTCCATAAC CTAGTAGTGG TATACttttt 002960
002961 tgtttgtttg ttttgagacg gagtctcgct ctgttgccca ggctggagtg cagtggcaca gtctctgctc actgcaacct 003040
003041 tctctttcta ggctcaagcg attcccctgc ctcagcctcc cgaatagctg ggattacggg ctcctgccac catgcctggc 003120
003121 tatttttttg tatttttagt agagatgggg attcgccatc ttggccaggc cagtctcgaa ctcctgatct caggtgaggt 003200
003201 caggaggtta tcagcctgcc tcagcctccc aaagtgctgg ggttacagat atgagccact gcacctggcc AACTTTTTAA 003280
003281 AACTCTGTAA GATAAAATGG AATGTAATTG AAATGATCAC ACTTAATTGG AGTTGGACTT TTTCTCATGA GTCCAACCTA 003360
003361 CCTTTCATAT AGGCAGGAAA AAATGCTGGC ATTTGTATAA AAAACAAGCT TTTGTGCTAG ACTCTGTCCA AGGCATTTTA 003440
003441 AATTGTGTTA CAATATCCAC CCAGCTGACC TTAGAGATAG ATGACCTTTC CTTTCCCTGA GAGCTGGTAG AGCTAATGAG 003520
003521 GCTCAAGGCT TAGATATAAC CCTCCTGCTG TTGGCTCCAG AGCCTGTGCT GTACTAGGTT TGTTGCCTGC TCAAGGCACA 003600
003601 AATCAGTCAG TGGTAAGTGC GGCCCTGGAA TCCATATCTT CCTGCTGTGC CCCTCttttt tttttttttt aattttaaaG 003680
003681 CTATGATGAA CCTGAAATCT AGATTTAGGT GAAATACTGG AAAGGGTGGT TTTTGTGACT GCTTATGGTT TTGTGACCCC 003760
003761 CTGGGAGTTC CCTAAACTTT TACCTTGCCC ATACTTGGTC AGTTTTGCCA GTGTACTTGA GATTTAATCT GTGAAAAAAT 003840
003841 TTCTCTTTTC ATACTTAATT CCGTCATTCT GTCCTGAGCT GAAAACTTTG GTATCAGCTT AAAGAGTAAC ATAATACGTA 003920
003921 AAGGGCTATC TCTTCCTGAC TAGTTTACAA TGCACTAGAA TCATTTTGTA TGGTGACTGC TCTCACTCAG TTCGACTGGG 004000
004001 TGGGACTCAA AAGATATATT TACCAAAGAC AGTTCTTTCC ACAGTATGCC TTAAGCCTTC TTACTCATGG GGACTTTGTG 004080
004081 TTCAAGGCAC CTTAGTACTC ATTCATTCTG TCTGGGGCTT TGTCTCTGCT GTCTTCATTT TCTTTTTGTG GAGGTAAAAA 004160
004161 AGTAACAAGA TAAAGCAAAA CAATAAAACC ATTGAAGTAA AACGGTACAT GACAGTGATA CCTTTGAAAT ACAGTAagcc 004240
004241 tgggcaacat agtgagacct ggtctctgca aaataaaaaa ggccagatgt gacgtgggtg cctgtagtcc agactattca 004320
004321 ggaggctgag gtgtgaggat catttgaacc tgagaggttg aggctacagt gagccatgtt gttgccattg tactccagcc 004400
004401 tgggagacag agcaagatcc tgtccaaaaa aagaagaaaa agaaTACAGT ATACTGAAAT CAAGGTATTT ATAGTTAGTA 004480
004481 GAGCATAATT TGGTCACATT GCACTGGATA GTTTTTGATT ATTGGTTAGG CTGTTGAAAG TCCTGTAATA CCCTTGGTAC 004560
004561 ATGTGGTATG GGTGAAAAGG TTCTCATGGC GACAAACACA ATCAGTACTT TCTGTGTAAG AGCAATGTTT GCTTTTTGGG 004640
004641 TAATATGCGT GACCCAGCAG GAAGATGAAC TATAACATGA GTTAGCTGGT ATATCCGTGG CTTATTATCT GGTGTTTCAT 004720
004721 AGTGGGGAAT TAAAACTACT AGGGAAAATA TCATTATTGC AGTATGCATA TGTAAGCTGT TCTATAGGAA AGAGTAGAAA 004800
004801 TTCATTGGAA CATTTGATAT CAGTATGATT GGAAGATGGT TTCCACTTTT GAATGTCATG TCCCTGAATG TGGATTAAGG 004880
004881 TCCGCGTGCA TGTGTGTGCT AATTTGCATT AACAAGTATT TACAGGCATT CTAAGTATGG GAAATGTGAT GGTGGGCAAG 004960
004961 AAAGAGCCTA CTCTGGAGAC AGACTGTAAA CAGTAAATAA AAATGTCAGG TGATGATAAT AGCGGTGAAG AAAATAAGAA 005040
005041 AACAATGTGA AATAACTCAG GGGATGTTAC TTTAGAGTGG TCACAAAGAT AATCCCTGTT CTGAAGCCTT TTCTGCCAGT 005120
005121 AGGGCAGTCG AACTTGATCT GTGGGCTGGA TGAAAATGAC ATTAAACAAA GTAAATAATT TGTTTAGCCC TGAGCATCTT 005200
005201 GAGAAGTTAA TCCAAAGGAT GGAAGTGGGC TGGTTGAAGT GTTCCCTCTG TTTATATCTT TTTGGTTTGT GAATAGGGAC 005280
005281 CTGGCTCAAA AGAGCTTAAG GGAGATCATT AGTGGTACCT TGTAAAGGCT AAGAAAGAGG AGTGTTGTCT GCTTTTTTTA 005360
005361 AAAAATCATC CTGATAAAAA ATGTGGAGAT GTATTGTAAT ATTGGTGAGT GTTAGACAGT GTA
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Predicted Small Protein

Name NONHSAT087037_smProtein_1517:1693
Length 59
Molecular weight 6920.2508
Aromaticity 0.206896551724
Instability index 59.5775862069
Isoelectric point 9.18414306641
Runs 8
Runs residual 0.0186623721106
Runs probability 0.0488319201555
Amino acid sequence MLQYVFLRSLFIFIYYLIFKIKSPFIYLFILTQCCSVVQAGVQWHDLSSLQPLPPSFR
Secondary structure LHHHHHHHHHHHHHHHHHHHHLLLEEEEEEHHHHHHHHHLLEEEEELLLLLLLLLLLL
PRMN LLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLL
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