NONHSAT087008

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT087008

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

4377 nt

Genomic location

chr22-:42392239..42398032

Exon number

3

Exons

42392239..42395473,42396305..42396490,42397077..42398032

Genome context

Sequence
000001 CCGGAGTCAA AGCCGATTCT CGGACCAGTC CCATCCCACA GCAGCCTGCC TCCTCTTTCG ACATCACAGA GGCTGCTGTG 000080
000081 TCCTTCGCCA AGGACTCCCT GGCAGGTGGA GTGGCCGCAG CCATCTCCAA GATGGCGGTA GCACCCATCG AGCGGGTCAA 000160
000161 GCTGCTGCTA CAGGTGCAGC ATGCCAGCAA GCAGATCACT GCAGATAAGC AATACAAGGG CATTAGAGAC TGCATGGTCT 000240
000241 GTATTCCCAA GGAGCACGGA GTCCTGTCCT GGTGCGGTAA CCTGGCCAGT GTCATCAGAT ACTTCCCCCA CCCAGGCTCT 000320
000321 TAACTTCACC TTCAAAGATA AATACAAGCA GATCTTCCTG GATGGTGTGG ACAAGAGATC CCAGTTTTGG CGCTACTTTG 000400
000401 CAGGGAATCT GGCATCAGGC GGTGCCACTG GGGCCACATC CTTGTGTTTT GTGTACCCTC TTGATTTTGC CCATACTCGT 000480
000481 GTAGCAGCTG ATGTGGGCAA AGCTGGAGCT GAAAGGGAAT TGCGAGGTTT CGGTGACTGC CTAGTTAAGA TCTACAAATC 000560
000561 TGACGGGATT AAGAGCCTGT ACCAAGGCTT TAACGTGTCT GTGCAGGGTA TTATCTACCG AGCTGCCTGC TGCCTACTTC 000640
000641 GGTAACTATG ACACTGCAAA GGGAATGCTT CCGGATCCCA AGAACACTCA CATTGTCATC AGTTGGATGA TGCACAGACT 000720
000721 GTCACTGCCG TTGCTGGGTT GACTTCCTAT TCATTTAACA CCATTTGCTG CTACATGATG ATGCAGTCAG GATGCAAAGG 000800
000801 AACTGACATC ATGTACACAG GCACATTTGA CTGCTGGAGG AAGATTACTC ATGATGAAGG AAGCAAAGCT GTTTTCAAGG 000880
000881 GTGCATGGTC CAGTGTTCTC AGAGGCATGG GTGGTGCTTT TGTGCTTGTC TTGTATGATG AAACCAAGAA GTACATTCAC 000960
000961 TCCTAATAAA TAACAAATTT GGAGAAATAA AAATATCTTa agaaaagaaa aaagaaaaga aaagaaaGGC TTCACACCAT 001040
001041 GGAATGACAA GTGCTCAAAT GGCTCTCAGT AAGTGCTCAC GGGGACACCA CTGTCAGAGT GGTGAGCAAT CATCTACCAC 001120
001121 AAAATGGAAC AAAGCAGCAG AGACATCTCC CTGGTTGGAG CAAGGAGGAA ACATGGCTTT AGAAAGTTTC CAGGTCCAAG 001200
001201 GAGAAGCCCC ACAACAGTTT GAGATCTTTC CAGAATGATC CACACTCGAC CTCCTCATCC CTCTTACCAA AGAGCGACAC 001280
001281 CTTGTTCGTG GAAGTAGGAG GAGATACACA CCCAGTACCT GTCCTCATCC AACAAAGTCG CAGGCACCCA AGGGCAGCCA 001360
001361 CGCTGCCACC GAAGGCCCCC GGCTGCTCAC AACCGCCGGT CAGCTCCGGC CTCTCTTCGA AGGACACACG CGTCTCGCAC 001440
001441 CCCCTCCCCG CCCCGCCCTG AGGAGACATG CGTCTGGGCC CCGCGCCTTG AAAAGGCGCA TTCCCACCCC CACCCCTCAA 001520
001521 ACGCGCGAGG CCACGCGTTC CGGCCTCCGC CACCTCCACA TGCCGGAACA CCAGTGAGGG GCGCGCGCTC CCAAAGGTCG 001600
001601 GGGGCGGAGC TAAGAGCGCC GCGCCCAAAA AAGGCGGCAA AGTCCCTGAC TCGCTGAGAG TTTGCGAGCC GCCATGTCTA 001680
001681 TCTCATTCGT CTCCTCTCCT CCGACAGCAC GCCGTGCTTC CCCTCAGGCA CCTTTCACCG TTAGGGATGA GGGCTCCGCG 001760
001761 GCGGTTCTCG GTGTGGCTCT GATTCACCGC CATCTTGCTT CGGGCCTCCT GCCGCCCCGT AGATGGAAAG GGGCGGGACC 001840
001841 TGCGCCGAGC TGTGGGGCGC GGTTCTGAAG GGGAGGGCGG AGATTATGAC GTAaggagga ggaggaggag gagCGAGACC 001920
001921 GGGTCACGTG GTGGGGCAGT GCCCGGGGAG CGGGGCGGAG TCAGGGTAGA GGCCCCCGCC GAGAAAGGGG AGAAAGAGGC 002000
002001 GGGCCCTGAG AATTGGCTCG AGCGCGAAGG GGTGAGTGAT AGGTGAGTGG CCTCCCGACC TCACCTGCCC CCTTAGCCCC 002080
002081 CTGCCTTTAG GTATGGACTT GGGTTGGTCC TGTCAGGAAT gatctcagct cactgcacct ccaacctccc atgctcaagc 002160
002161 catcttccca cctcaacctc ccATCCATTA CTCACTTTGG TTATGAAACA CTAGAAAATA ATGACTGAGG CCCGACCTGA 002240
002241 CGCCAACTGA AGATGAACTG ACCTCACAAA GTGTTTTCAT CTCTAATATC TGTGGCTATT TCTTACCAAG AGAGTCTCAC 002320
002321 CCTCCACACA TGGGTGAGAT GACATAATGG CTGATTTGGT CAAGGAGCAC AAATAAGACA GGCCAGGCAG TTACTGTTCA 002400
002401 AACAGCAATG TTTAGTTGTA CAACACATAA AGTCTAGCAA CAATTACAGG ACCAGTTTGA GTGTCTGTTT GCTTGTTTTC 002480
002481 AATTGGGAAA TTTAACTGTA ATGTCACCGT AAGATTGGCT GGGACTGGTA ACATTTAAGA AACGGGTTGT TCTTGCATCC 002560
002561 CCTAGGCGTG GGCCTCTTGC TCCATCAGGA CTTGGTTGTA GATGAATGGC CCACAAGTCA CCAGCCTTTG AGCAAGTTGT 002640
002641 GTCCAGGTGG AGACAGGAAG AGGGTGGGCA AAGGGGAATT CTATAAAGAC ACAGTGTGTG GGGCAGTGGC AGTCAACATT 002720
002721 CGCAAACATT CATGCATCTG ATGGGGGGCT TTGCCCTCCC TTGGGTATTT TCCATTAGCC TACAGTGACC ACCTGTGGTC 002800
002801 AGGCTAATTC ATTACTCACA TTAATGGGGA AGGGGGTTGG GGGTAGGAGT AGGTAGGGTA GGTGGGAAGA GATCCCTCTT 002880
002881 ATTGCTGAGT GGACAGAAGG GTGCTAGTTT TTCCTTAGCG TGTACATATT GTGGGTTTCT GGGGgtttgt gtgtgtgttt 002960
002961 agtttttgtt tgtttgtttg GACAGAAGAA AGTCAACTCC AGCAATGTCT TCTTAGGAAA ACCACTCTTC CTCAGTGGCT 003040
003041 GCGTTATGAG GTGGGGAGGA TGTACAACCG CACTCTGGGA CAGCCACAAG TGGTGATTTT TTAAAAAGTG ATCCTAGCCC 003120
003121 TTGCTCCCCA ACATCTGTAG TGACCCACCC TCATGAATAT CTTTAAGTAA TGAAGGAGAC ACCCTTGTCC CACTTTGGGG 003200
003201 CTCACACAGC TGATCTCAAT GAATCTAGTA AGCAGAAAAA TTGCTTTCTT GACCCTTTAA GGAAGCCAAG AGTAGCTCAT 003280
003281 GCAGATGAAT GGGTAGGGAG CAATGCCATT GCCCTTAGAG ATGGTTACAA GTAGCTGGGA TGGGCTTACA AGGGCAGAAG 003360
003361 GAGCTCTTGA TGAGTTCTTT CACCCTGCAG ATGGGCTAGG ACCGGCTGAC GCAGATGATG CAGTAGGGCT GTACTGGCAG 003440
003441 AACCCCACTC CACTGGGAGG AGAGGAGTGG TTTGGATAAA TGGAGGATGC AACTGGCCTA AAGAGGCAGC TGGCCCCTCC 003520
003521 CACCTACTGA GGGCTGAGAG GGGCTGTGGT GGTGAGCTGG ACGAGCACAG CACTAAAAAG GGCTTGGCCC TGCAGCAATA 003600
003601 ACAGCTGAGA GGAATGGAGT GAGAAGCAGC GCTTGAAATG GCCTTCATTC AGCAGTGGGG CAGGGGGTGG CTGGCACAGG 003680
003681 TGGAAGGACA GTGCCCAGGA GGCCTTCTCC CTGCAGGGGG GTTGAGAACG GTTGAGGGTG TGGAGACCAG CAGCTGGCAG 003760
003761 CAGACATATA AAATACCTTC TCCAGGGAGG CTCAGATCAT GGTTCAGGGG TGCCAGGCAC CATTCCTACT CAGCCTTTCC 003840
003841 AACGCCCACC TCCCATGCCC ATAGATCTTC CCCTGCTGGT CCAAGGTCTC CATACAGGAC TGCTTCTACA GTAGCCAAGG 003920
003921 ATCCCTGTTC TGTTGAAATG TATAACCTCT GGGCTGTAGC GCTGCTGCTG TTCTGTCCTG ACAGGTGCCT ACCCTGTAAC 004000
004001 TTTGTGAGCA AGGGAGGATG AGGGCTGGGT TGGCAGCCTC CAGGAAAGAC CGAGAGCATA GGTTGGGGTC ACTGGTGACC 004080
004081 TGATCACCGC CCCCCTTTCT CCTGGTCCAT TGAATCTTGG GTCTTGAGTC TATGTTTTTT TTCCTAGCAC CTGAGTGATA 004160
004161 AAAGACTGGG ATTATAAGTG CTGGGATTCA TAGAGGACCA GTGAAACACC TAGGCTGAAC CAGGAGATGG GACAGAAGGT 004240
004241 TGTATGAGGT TATTGTAAAC AGTTTCACTT AGTGTTTTCC CTTCCCTAAG GCTAAACTGT TTCCCTGGCC CCGAATTTCA 004320
004321 TGAATCTTAC AGATTAAAGG AAAAGAGTAA CTTACTTGTA CAACAAGCAG GGGAAAT
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Predicted Small Protein

Name NONHSAT087008_smProtein_1673:1867
Length 65
Molecular weight 6665.6287
Aromaticity 0.0625
Instability index 92.2578125
Isoelectric point 11.8787231445
Runs 7
Runs residual 0.03921875
Runs probability 0.0418906301261
Amino acid sequence MSISFVSSPPTARRASPQAPFTVRDEGSAAVLGVALIHRHLASGLLPPRRWKGAGPAPSC
GARF
Secondary structure LEEEEELLLLLLLLLLLLLLLEELLLLLHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
LLLL
PRMN -
PiMo -