NONHSAT086612

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT086612

Source

NONCODE4.0

Same with

,

Classification

sense

Length

594 nt

Genomic location

chr22+:38014410..38016256

Exon number

2

Exons

38014410..38014553,38015807..38016256

Genome context

Sequence
000001 TCTGATGCAC CTGGGCGTCC CCTCCCATCC CCCCTCCCTG CACAGGTGCT GGAAACATGC ATGAAGAGCT GCGGCAAGCG 000080
000081 GTTCCACGAC GAAGTGGGCA AGTTCCGCTT TCTCAACGAG CTCATCAAGG TCGTGTCTCC CAAGGGGACT CTGCTGTGAG 000160
000161 AGCCACTTTC CCCAGCCCAG TTTGCTGCTA GGAGACGGAG AGTAGGCCCA GGGCCTCCCA GTTCCACCCT CACCCCTCCC 000240
000241 TGGGCAGCCT GGAGACCTCT GGCTCCTCTT TCCTGGGATG TCAAGGCTAA GTCCCCAGAG CCGACTATGA GCAGGCCTGT 000320
000321 CCCTCATGTC AGTTCTGCAT CCTCACCATG GTGCCATCTA GCAGGTGGGG AAACAGACAC TGAGGGCTGa cccagctaat 000400
000401 aagtggcagg ggtagtaggt gaactcagtc taccCCAGGC TGGTTGGGCG GGGCTATGAG GACCCTGTAG GCTAGAGGGC 000480
000481 TTCCCGGGGA GTCCTGGGGA GGCAGTAGGG TGTGGACAGG GCTTGAGACT GAAGTGAGTG GGGCTGGGCA GTATCAAAGG 000560
000561 CCTCCCCACT GTGTCCCTGA AGTATCTGGG CTCT
[back to top]

Predicted Small Protein

Name NONHSAT086612_smProtein_56:190
Length 45
Molecular weight 4830.412
Aromaticity 0.0227272727273
Instability index 104.411363636
Isoelectric point 10.2549438477
Runs 7
Runs residual 0.00401069518717
Runs probability 0.0378277437101
Amino acid sequence MHEELRQAVPRRSGQVPLSQRAHQGRVSQGDSAVRATFPSPVCC
Secondary structure LLHHHHHHLLLLLLLLLLLLLLLLLEELLLLLEEEELLLLLLLL
PRMN -
PiMo -