NONHSAT084754
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084754 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1091 nt |
Genomic location |
chr22-:30431528..30476884 |
Exon number |
4 |
Exons |
30431528..30431619,30436166..30436267,30446450..30446578,30476117..30476884 |
Genome context |
|
Sequence |
000001 CCCAGGTAAG ATAAACTTCC CCAAAGCTCC ACCACACACG GCCCCCTCCA ATGTCGGGCA CAGACATCGT CTGCCCTGCC 000080
000081 AGCCTCATCA TGGCTCATTA TGGCTGCTGC TTGCTCAGCA AGTTTGATTT CATGTCCAGA AAAATCTGAA TTTCAAAACT 000160 000161 ACCTGGGTGC TCTCTGTCCA GTTCTGGGGG AAATCGCCTC CCTTTTGCCT TCCTCCTCAG CCCCCTGCCC TCCCGATTCT 000240 000241 CTTCACAGTA CTTTAGGCCC TCACGAAATA TGATACTTTC AAATCCAACT TAAAGCCTTA AGTAATAAGA AAAGAAAAAA 000320 000321 AAATTGTTTT TTGACATAAA GACAGAACTA ACAACGCCCG AGTGCCCTCT CTGGGCCGAG ACCTCGCGTC TCAACAGCCC 000400 000401 TCACCTCAGC TCGTCGACGC TTCCCTCCCA CCGGGGGTCA ACGGCCTTTT CCGGCCCAAA CCCGCTCCTC GGCTCATGAA 000480 000481 TAGTCAACGA GGCCTTTCTG GGCGGGACCA GAGGTTTCCT CATGAATAAT TCATGACCCG TCCACGGCTA GCCTGGGCGA 000560 000561 CCGGCCTCGC TAGACTTCAT GAATATGCAA AGCAGGGGCG AACGGCGGCT AGCCGGCCCC TAGCCCGCCC GGCCCCTCAG 000640 000641 CAGCCGCCTC TCAGCCACGG GCTGCACACT GACCCGACGC GACCTTCGGT CAGGGGCCGC CAGCCTGGGC CACCTATACA 000720 000721 ACGACAGCCT GCTCCGGGGC TTCCTGAGGA GGTGCCTGCC CCGCCGAGGT TCAACAGCTT TGGAGAGCAG GACATCTTTT 000800 000801 CCTCTCAGCC TGGCCCTCTG CAATGGAGGC CATAAATAGG CCAGTAGTGG AAGCTACAGA ACACGTGAGC ATGGCAGGGG 000880 000881 CTGAGCTCCA TTTCAAGATA TGGGTAAGAG GAGGGATGCT GTTGCCTTGG AGCTGCCAGG CTGCATGGCA GACAAGCAGG 000960 000961 ATTCCTGCTG CCTCCCATGG AGACTATACT GGAACGCAGT GAAGGGAAGG AGCAAGACAG GATACTTGCT GGAGGCAGAG 001040 001041 ACTTGAAAGA ATTTGCTCTG ACTTGAAAGA ATTTGCTTTG CAGGCTGGAG G |
Predicted Small Protein
Name | NONHSAT084754_smProtein_899:1045 |
Length | 49 |
Molecular weight | 5432.2653 |
Aromaticity | 0.0833333333333 |
Instability index | 67.4104166667 |
Isoelectric point | 8.56866455078 |
Runs | 8 |
Runs residual | 0.00109649122807 |
Runs probability | 0.0480590885003 |
Amino acid sequence | MGKRRDAVALELPGCMADKQDSCCLPWRLYWNAVKGRSKTGYLLEAET |
Secondary structure | LLLLHHHHHHLLLLLLLLLLLLLLLLLLEEHHHHLLLLLLLEEEEELL |
PRMN | - |
PiMo | - |