NONHSAT084532

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT084532

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

8467 nt

Genomic location

chr22+:27063123..27072436

Exon number

2

Exons

27063123..27063273,27064121..27072436

Genome context

Sequence
000001 GAatttagca agtcccttca ttcagcaccg gcatggacca agcaacttct ctgagccaga tgctggggac gcagaggtga 000080
000081 acccagagac atgatcccat ctgctcAGAT CTTCATGTCA GAACACGCTT TATTACAGTC TCGGCAAGGG GGTGGCTCCA 000160
000161 TCTGGGCCGC ATCTCCAGGA CTCCTGGCCT GGACTTCTCT TTGGACCTCG GGTGACCTTG GATTCTGGCC ACAGTGACTT 000240
000241 AGCGGTCAGA CTCCGGTGGT TTTCTAGCCC GCTGGGTGAC TCCCTGAAGA TCTCATCCTC TTCACACCTG TTGGGATGGA 000320
000321 GCCTCCCATG GATAGGAACT CTTCCTGGTT GATGCTCAGC AGATGACTGA TCTGGCTCTG GAGGACAGCT CCAGGGGTAT 000400
000401 GAGGGAGGCC TGGCAGCCCA CTACTCCCTC CTCACCTGCT CGGGCCCTGC CTGCTGGGCC CTATTGTCTG GGTCTGGGGG 000480
000481 CCCTTTCCTG CCCCATGTGA ACTTGATTCC TCCTCGCGTT TCTGCCGGTG ACCAGACAGA GCCTGGCCTG GGCCAAGTCC 000560
000561 CCACTGACCA CACTTTCCCC AAGGCTGGGT CTCAAAGGAC CCTACAGGAT GGGGACAGGA ACAAGGATGG GAGTCGGGGA 000640
000641 GGGGCTGTCA GGCAGAGGGC AGATGCAGCT CCTCGGGTGC CGCTGGCTGG AGTCCTTTGT CTCCATTTGC TCAGTGCGTA 000720
000721 ATTGTCATTT TGTGGGGGAC TTCCTTGGTG GGGCTTTTCC ATGCTTTTCC TCTCCCTGAT GGTTACAAAG AGGAGACAGT 000800
000801 CAGGATCTGG GAGGAGCTGG AGCCTTCCCC CTGTGCTGTT GAACTCTGGG AGGGGCAGCC AGAGGGGCTG AGAGTGCACC 000880
000881 ATCCTGAAAA GAGAGGGTCT TTAAGAGATA AGATTTAGGC TAGGGAAATT CACTAGAAAG AGACAGGTGG CCCTGGGTTT 000960
000961 TTTTTCCTGC CATCCAAAGG GAACCAGTCT TACCCAAAGG CTTAAGGGGT CACCTTAGCC CAGTCTCAGG ACACTCTTCT 001040
001041 CCAATCAGAT CGCTGCTTCT AGTTGCACTG CTCCTGGATT CTGTTCTTGG GGAACAGAAG GTGGCAGGAC AGGCCCCACA 001120
001121 ATCTGCAATT CCAGCTCCCT CCAGAGGAGA CAGTCCCAGC GTTTGCAAGA GAGCAGCTTG TGGCCTCCCT TAGGCAAGTT 001200
001201 TAAAAGCCAG ATGTCCTTTT TCCCAGAATG CGGAGTGGTG TGTACtattc atcagcttgg gctgccacag caccatgcca 001280
001281 gactggatgg cttaaacatc aggaatttat tttctgccag ttctggaggc tggaaagtcc agatcaaggt gttaagactt 001360
001361 ggtttctggt gaggcctctc tccttggctt gcaggtggca ccttctcact atgtcctcac atggcctttt ctctgtggag 001440
001441 agggacagag agcatgagca ggctctggtg tctcctcctc ttcttataaa gacactaata tcaccatatt agggcttaaa 001520
001521 cctatgacct catttaacct taacccctta aaggtcccat ctccaaaaac agtcacatag caggctactg cttcaacata 001600
001601 tgcatttggg ggaggggaca ccattcagtt cttaacaGGG TGGTCACCGC AAACATGGAA AGTCAGAGCC TTCTCCCCTT 001680
001681 CAGAATTCCC GCCCCCACCC AGGGATGGGG AGGAGGAGCA GAGAGGTATG GGAAGCAGAC ACGGAGAGTG GCAGGTACCA 001760
001761 TGCTGGGGTG GCTCAGGAGT GCTTCGGAGG ACATATGGAA CTGGCAGGGC TCAGTGCAGG GAGGCGGAGG CCCTGGGAGA 001840
001841 GCCGTGTCCT GAGAAGGGCC TGGGCTACAa ccctgggcaa gttacttcac ctctgagcct ccgatgctct gtgaaatgga 001920
001921 aggaatgtgc ttgcctgtca ggtgcaggga gaattcagtg agattgtgtg cctagcacag tgcctgactc ccagtaggtg 002000
002001 ctcagcaaat gCTCCCATCC ATCTGGGAGT ATAGACTTAG GGTTTATCTA TTTTTTTTTT TTTTTGGCTC TCTGGACTTT 002080
002081 AAAACTCAGC ATCTTCTGAA CCAGAGGCAT TTCTGATTAG CCCTTCCCTA CCTATTTTCC TAGTATCACT CTTTAATCAG 002160
002161 CTTGGGGAGG TGGCAGCATT TCATGGCCTC CGTAGTAACT CACAATGCTT CCTGGGGTAT TTAAATTCTA CTCTCTCATC 002240
002241 AGCactgagc acctactttg ggccctttcc cgtgctagcc atttggggga aatataggtg aaGAGTGGCT GGGGTTTGAA 002320
002321 CCTTTAGGAT TTCACAGCCA TGCTGGATGG GATAAAACCA GCTCACATGG AGAATCAGAG AATGGGACAG TGCCACAAAA 002400
002401 CAGTCTACTG AGGCACAAGT TCTGAGTGCC TGGGAAGTGG TAGAGAGACC CCAGAGAGGG CTGCTGCAGT CTGGAACAGC 002480
002481 TTCCTAGCAA GCTGTACCAA ACAGGGCCTT GAAGGATGAG AAAGATCTGG CTGAGATGAT ACCCGACCCT CTAGGGAAAT 002560
002561 TCTTAAAGTA ACTTCTAGGA AATGTCATTG CTCCTTaaaa aaaaaaaaaa aaaaaaaaaa GCAGGTTCTA ATTCAAATTC 002640
002641 CGCTGCACTA CTGAAGtagt gcaggactta tcagaacctt taaaatgcta atggcaattt caaatactca gggacagggc 002720
002721 ataggatgaa gtgttccttg acttttatgg ccgtagaatc tttttctcat ggaacatcGT TTAGAACTGT GGGAGATGCT 002800
002801 AGGCTGGGGT TTCTATGGGA AAAGTACAGC AGTGATAGAA GATGGCATAA TTAGGGTACA CTTAGGTGCT TTGTAGCATT 002880
002881 GGCTGAAAAG GAAGCAGACC GGGTGGGCGT GGGGGAGTCT CAACTTGGTT CCAGGAGCCA GGCCAGCTTG ATGCGTTTTT 002960
002961 TTTTTTTCTA ATGGTGGGAG GGCAGGCCAA TAGTTGGAGA AACTAGAGGC CTGACAGTCG GTGATGGAAG AGATGTCTAC 003040
003041 TAAGCACGGT TGTCAGATCT TTTGCGGAGA GATGCGGGTG TGCGTGTGTC TGTCAGAGTG TAACAGGATC CAGCCCTCTG 003120
003121 GGAAGGGGCT GACCAGAACC AGGCAGGGGG TTTCTGTCTA GGACAAGTAG GGTCCATTTT CAGGGGAGCT GAAATATTTG 003200
003201 CAGGGGGTGC TCTGAGACCC ACAGCCAATA AATAGGGAAG CAACATGCTT TTGGGCAGGG TCCATGTGGT TAGGGTTGAT 003280
003281 TTTGATGGGG CTGGGGGGCT TAGAGTTAGA CCCCCTGCCC TGGTCAGGCC CCACTCCCTG GCTGGTGGGG GCGGGAGGCC 003360
003361 TCTGAAGCTG CAGCTGGAGG GGCCGGGGCA GTGTTGCATG GTGTGATTAA CCTACTAACC CAGGGCTCAG CCGGGACGCT 003440
003441 GTGGCGTGTG ACGAGGTGCC TGGCCTTCTG CCAACCAACT AACCCACTAA CCAGGCCCGA GCATGCCCTA CTAACCACCC 003520
003521 CCCCGCAGCC AGATCCTACT AACTGTGCAG CTCATGGGCC TTTCAAGGGG CTGGGATATG GGGGCAGCCA AGGCTCCAGA 003600
003601 AGGCTCTGCC TATGGGCTGG GATCTTTGTG CAGACCCACG TTCCAGGACA GAGAATGCAA ATAAGACTCA CCAActctgc 003680
003681 cacttcctgt tgagtgagtt tgagtaagtc acctcacttc tctcaacctc agtttcctca gtggtagaat gcgagttctg 003760
003761 ataccttaca ggttgcagtg aggattCCCG TCAATATAAG GGTCTCAGCA CATGGCAGAC ACCTAAAAAA AAAAAAAGTA 003840
003841 TGAGGATGGA GGAAGGCCCC TCAAACCTGG TTGAACACGT CTGCTGCCTA GGCCCTGGCC TCTCTGGGTG TTCTGCACAC 003920
003921 AGATCCTTCT GCCTGGGGCA AGACACTTGG CTTTGAATCC ATGTCACTTC CCCACATTCT TCCTCCGTCT CAGCTTTCTT 004000
004001 TTCTGTAGGC AGCTCTTTTG TTCGATTACT AACCCGTCTA ACCCCTGGGG TGCCTCAACT GCACCCCGAT CATCCCTTAA 004080
004081 CAAACTAACG GACCTGCGTG CGTTCTTCCT TTTCTCTTAG CGACTCCTGT GTGTGTCTGC TGAGGTGCCC TGTCCGCTGG 004160
004161 TGCTGTGCTC TGACTTACTA ACCCAGCCCC TACTAACCCT GTTTTCTCTT CTTACTAACC CCAGCCCTGC CGAGCTCTGG 004240
004241 GCTCCCCCCG GGGGCTGGTC CCCCTCCTTT TGGCAAGCAG ATGACCTGGG GCTACTGGCC CTGTAGACAG ATGTCCCACT 004320
004321 TTGCTGCCCC ATATTGGCTG TAAGATCAGA GTCCACTGGG CCAGGTCTAA GGCAGGGGAT GGCCCTATTA ACAAGACTCA 004400
004401 GAGGAGGAAG AGGTGGTCCT GTGGATGTGG GAGGCTGGAC TCTGAGTATG ACATCTCTCC TATGTGCAGA AGTCTGGTTG 004480
004481 CCACTGGGAG TAGGTGGGAC CAGGGAAATC TCTGGGACGT GAGTGTGGAG GCCTGTTGGT CTAGACTCTA GACTGTGGAG 004560
004561 CTCTGAGCTT TTGTGTCCTC TGGAAGGAAG CTGGGGAAGA ATCCTCTCCA TTGTTAAGTG ACGGGGATAG AAGCTGTCCT 004640
004641 GCACAGGAAG TCACGAGGGG GGCGTATCCC ACGAGGAAGG CAGGAGGGGG CGTGCCCCTC ACCGGAAATT AGCAGAGGGG 004720
004721 CGTGTCCCAC ACCGGAAGTC AGAAAGCGGA GCCTTTCTTA CACCGGAAGT CAATGAAGCG GGTCTTTCCT ACGCTAAAAA 004800
004801 CCACTGAGTG GAGTATTTAG TACACAGGAA GTCGGCCAGA GAAACATTTC TCATATTTGA AGGCCGGAAA GAGGGACATT 004880
004881 TCTGACACCG GAAGTCAGTG AGAGGACTCT TTCCCACACA GGAAGTCAGC TAGAGAGCCG TCTCCCCTCT CTGGAGCCGA 004960
004961 GAGAGGCCGG TTTCCCCCAC CGTAAGTAGA CGTGGGGCCG TGACCGGAAG TCCTTGGGAA AGATCCGTCC CATTCCCGGA 005040
005041 AGCTAGAGGG CGTTAGTTGT CGGGTTGAAA AGGGGTGTGG GGAGGGGAAG CAGCTTTACC CCGGGCTCGG AGTTTGCAGG 005120
005121 AGAGAGAAGT GGGGAGCAAG AAGTGAACCT CAGGGGCTCA CAGGGTTCCC GCAGATGCTC AGGCCGGCCA GGAATGCATC 005200
005201 TCTGGCTCTC TGTTCCCACG GACGTCACTG CCTCAGCCAG CCTCCCCCAG AGCCCGCCAG CCGCTAAGCC GGGGCCACAC 005280
005281 CTGGGGGTGA TTTCATGCCT CACCTCCAGT AGGCACCTTG GTTTCTTTGG GCTAATCTCT GGCTCCCTTG CGCTAACTCT 005360
005361 TGCTCTCACC CAGCTAATCC CTGCCTCACC CTGACTGCCC CAGGGGCTGA CCACTAACAA CCAACCTGGC CCTGTCTGGG 005440
005441 GGTTCCAGGC TCCTGGCCTG GCCCTGACCG GTTCTTAATT AACCTTTCCT TCACCTTGAC TAACTCCTGC CTTCCTGGTC 005520
005521 TGTTCCTTTC AGCAGAAACT AATGGTTTGT GGATTTTTTT CTGACTAACA ACAGGTCTAA CATTCCTCGT TACTGTTAAC 005600
005601 AGCTTGGATG TCGGCATGGC TGGGAAGGGG CTAACACAGC TTTGAACTTG GCTAACACAG GTTTGAACTT GGCTAACACA 005680
005681 GGTTTGAACT TGACTAACAC AGGGAAAAGC ATAGCTAACA ATTTTGGGCG TGGTGGCTGC TCTGAGTCAG AACAATCAGA 005760
005761 AGTCGGTAAA GATGGTAGTT TTCTAAAGGA GGTGCCAGGG CTCTGGTGTG GACCAGGCCT GATGGAGCAG TGGTACCCAC 005840
005841 CAAGGTGGGG TCAGAAGTAT AGCCAGTCTT GCAAGGTTTT GGCCATTGGG CATATCTTCA CTCCTCATAG TCTGCATTTG 005920
005921 GTTTCAGTTC TTAAAAAAAT ATAGCCTTAT AGCTACAGTA GTTTGCACAA GTAGATGCAG CTCTTATAAA CCTTAAAATA 006000
006001 CCTGTCTGGT GTCTACAGAG CATATGCCAT TTTGTATAGA GTCACCCTTC CCCAGGCCAG GGCCTAGAGT CTTCATTTTG 006080
006081 GGGACTTTGT GTTTTGGAAG TTCTAGGACA TAAAGCTTTA GATCAGAGTA TTCAGAAGGG TTATAACTCC GTCAGTCATT 006160
006161 TACATGTTAG TAGTATAAAT TATCTGAGCT TCCTGTTCTA ACTTTTAGCT CTTCTAGCAT AAACTCTTCT GTGCAATTTA 006240
006241 GCTGCACCGA GGAAACGGGA GTTTTTCTGG AAGGGACTTT TGATCTCTTT AGACTGAGGG AACGTCCTTT GGGAGTAGAG 006320
006321 GGGCAGGGAG CATACGCAAG GGATTCCAGG TGCAGGTAAA AGGTGGCACT AGTTCAAGGT TTTGCTGACT CAGTCTGGTA 006400
006401 GTCAGAGTCT GCAGGAGAAG ACAGTTCAAG GCAGGGCCTG GAGGATTGGA TCAGTTTAGG GACAGGTCAA AGGCTGGCTT 006480
006481 ACAGACCTTA GAGGCAGGTT GCTTGGGTCG TTGAATGCTA GTCTGGTGCT GAGAGCCCTT TTCTCTGGCA ACTGTGGACT 006560
006561 CAGAGCTAAC CAATTGTAGT TGGCAGTGGG GGTGAAGGGT GATCCAGAGG CCTGAGCTGC AGAGGGCACA AGAGAGAAAA 006640
006641 GATGTCTTAG AAAGAGCTTT GAGAACATGC CTTGGCTGCT GGCAGGGACC TTGGATGGGG TAGTCTACAC CCGGAAGTGC 006720
006721 CTGCCTGCCA TCCTCTAGTG GCTGCCTTGC TCCATTTCAC TCAAAGCAGG AAGCTCACAC CTCCTATTCC TGAAACTCCT 006800
006801 CTTTGTTTAA CTGCAAAGAC TTGATGCtgc taaggatcta ctatgtgcca ggcactgctc tgggcgctgg gacctgcacc 006880
006881 tgggcttttt cgtcatggtg cttttatagc ctagtgggag agttggtgaa gtagatagtg attcagtgag atgggtgtta 006960
006961 tgattggtca ggggtctgtg ggagCACCAA GGAGACAGAC aagattgatg tgcacctact ctgtgccagg cgtgtgccag 007040
007041 gcattgggga tgtagtggta gttaaacacc atttggtctt caggagcttt aattctagtg tgttgggtgc aggggggtgg 007120
007121 aatggggaca gagagacacc taatccaccc tgtggtggct ttctggagag ggaggcatct aagctgagct gtggctgggt 007200
007201 ggagtgtggg tggggatgag ttccgggcag cgagaGTGGT GGACACCAGT TTCTGGGGAT CAGAGAGGAT CCAAAGAGGT 007280
007281 TCTGGAAGGT TCATGTGGAA TGTAGCAAGA GATAGGAGAC ATGGACATGG TGCCGGGTCT GGTTGCCAAG AAGTTTAGAT 007360
007361 TTTATCCTTA GGCCTTGGGG AGCGACGGAT ATGATCTGAG AAAGGGAGTT AGTGGATTTG AGTTTTAGGC TGGCCATTTG 007440
007441 GCTTTTCCAG CCCAGGTGGA ACTCAGAGGA GTTTGCAATG GCCTCTGGCC ACATTTTAGA CAACTGAGCA GAACTTTTTG 007520
007521 AAACTAGGAA GACCCTTTGG TCCATCTTTT GATAAACAGA ATCCATACAT GTCTACCCCA GTTGGAAGTA TCTCTGCAAT 007600
007601 GACTGgaaag taaagaggac caaggtgaaa ataaaggctc ggaaggggag caatcttgaa aacatgtcat cccatggtgg 007680
007681 tgggaagtcc ctggagaaga tcaggggaaa cacagtcata ggctgcaagt ctataagata attccattgg ggagggagcc 007760
007761 catttgtcat gcatggctgc aaggggcaga tacaagtgtg gagtaagctt GCAAGAGCTG ATCCTGGTCC CAGAGAGGGA 007840
007841 AAAATATGCC TTGGTGGGTA ATGAACCTTT TGTTCCCAGA GGCAGAAGGA TTGGGACTAG GCCAACATAG AGATTGGCGA 007920
007921 TGGTTGTGAG ATTCTAAGAG TGTGTGTGCA TCTTGACAAT ATTAGAGGAG GCTGAGCCCA AGCAGGCACA TTCTCTTCGA 008000
008001 CCCCTCCCTC ATTCAGTCTG CTTTGGAGTC TACTGAACAT CAAGCTTGCT ATGAGCAGGA TCTTAGAGCT GAGGAATTGG 008080
008081 CCTCCCAATC CGAACAGGTG TTATAATCCT TTCTTAATAG GTTGTGCTGT GGACCCAATG TGAGGGCTGT GCTGGTGTAA 008160
008161 ATGGTGACAT GTTGAGCTGG GGGGATGCTT TCGGGGTGGG GGGACTGGTT CCATTCCATC AAAGGCCCTC TTGAGAGTCT 008240
008241 ATCCAGGGAC CCATTGTTTT ACTTTAACAG ACCAGAAAAG ATGTTTGTTT TCCATGTCAT TACCCCCAGG GGATACCGAA 008320
008321 TGTGTGGGTA GAAATTTCTC TGTAGATTAA AAATCAGATT TTTACATGGA TTCAACAAAG GAGCGTCACT TGGATTTTTG 008400
008401 TTTTCATCCA TGAATGTAGC TGCTTCTGTG TAAAATGCCA TTTTGCTATT AAAAATCAAT TCACGCT
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Predicted Small Protein

Name NONHSAT084532_smProtein_1727:1960
Length 78
Molecular weight 8266.3394
Aromaticity 0.0649350649351
Instability index 41.4077922078
Isoelectric point 8.89630126953
Runs 13
Runs residual 0.0327498588368
Runs probability 0.0490671667143
Amino acid sequence MGSRHGEWQVPCWGGSGVLRRTYGTGRAQCREAEALGEPCPEKGLGYNPGQVTSPLSLRC
SVKWKECACLSGAGRIQ
Secondary structure LLLLLLLEEEELLLLLEEEEELLLLLLHHHHHHHHLLLLLLLLLLLLLLLEELLLLEEEE
EEEEEEEEEELLLLEEL
PRMN -
PiMo -