NONHSAT083191
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT083191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
1828 nt |
Genomic location |
chr22-:17626940..17628825 |
Exon number |
2 |
Exons |
17626940..17628301,17628360..17628825 |
Genome context |
|
Sequence |
000001 CACACTCTGA ATGGGACGAG GACCAGGATG AGGGCGTAGG ACTTATGAAT CAATCAAGGG CTTGTGCTGG AGGCAAGAAT 000080
000081 AACACCATGA GCAGTAAAGG AGCGTGTGCG ATGGCGTGTG ATCGAAGGCC GGTAAGCTCA CAGGAGGGCG TCACAGGTGT 000160 000161 GGGGCGTGTG TGATGGCGTG TGATCGAAGG CCGGTAAGCT CACAGGAGGG CGCCACAGGT GTGGAGCGTG TGCGATGGCA 000240 000241 TGTGATCGAA GGCCTGTGAG CTCACAGGAG TGTGCCACAG GTGTGGGGCG TGTGCGATGG CGTGTGATTG AAGGCCGGTA 000320 000321 AGCTCACAGG AGGGCGCCAC AGGTGTGGGG CGTGTGCGAT GGCGTGTGAT CGAAGGCCGG TAAGCTCACA GGAGTGTGCC 000400 000401 ACAGGTGTGG GGCGTGTGCG ATGGCGTGTG ATCGAAGGCC GGTAAGCTCA CAGGAGTGTG CCACAGGTGT GGGGCGTGTG 000480 000481 CGATGGCATG TGATCGAAGG CCGGTAAGCT CACAGGAGTG CGCCACAGGT GTGGGGCGTG TGCGATGGCG TGTGATCGAA 000560 000561 GGCCTGTAAG CTCACAGGAG TGCGTCACAG GTGTGGGGCG TGTGCGATGG CGTGTGATCG AAGGCCGGTA AGCTCACAGG 000640 000641 AGGGCGTCAC AGGTGTGGGG CGTGTGCGAT GGCGTGTGAT CGAAGGCCGG TAAGCTCACA GGAGGGCGTC ACAGGTGTGG 000720 000721 GGCGTGTGCG ATGGCGTGTG ATCGAAGGCC GGTAAGCTCA CAGGAGGGCG TCACAGGTGT GGGGCGTGTG CGATGACGTG 000800 000801 TGATCGAAGG CCGGTAAGCT CACAGGAGGG CGTCACAGGT GTGGGGCGTG TGCGATGGCG TGTGATCGAA TGCCGGTAAG 000880 000881 CTCACAGGAG GGCGTCACAG GTGTGGGGCG TGTGCGATGG CGTGTGATCG AAGGCCGGTA AGCTCACAGG AGGGCGTCAC 000960 000961 AGGTGTGGGG CGTGTGCGAT GGCGTGTGAT CGAAGGCCGG TAAGCTCACA GGAGGGCGTC ACAGGTGTGG GGCGTGTGCG 001040 001041 ATGGCGTGTG ATCGAAGGCC GGTAAGCTCA CAGGAGGGCG TCACAGGTGT GGGGCGTGTG CGATGACGTG TGATTGAAGG 001120 001121 CCGGTAAGCT CACAGGAGGG CGTCACAGGT GTGGGGCGTG TGCGATGATG TGTGATTGAA GGCCGGTAAG CTCACAGGAG 001200 001201 GGCGTCACAG GTGTGGGGCG TGTGCGATGA CGTGTGATCG AAGGCCTGTA AGCTCACAGG AGTGTGCCAC AGGTGTGGAG 001280 001281 CGTGTGCGAT GGCGTGTGAT CGAAGGCCGG TAAGCTCACA GGAGGGCGTC ACAGGTGTGG GGCGTGTGCG ATGACGTGTG 001360 001361 ATTGAAGGCC GGTAAGCTCA CAGGAGGGCG CCACAGGTGT GGAGCGTGTG CGATGGCGTG TGATCGAAGG CCTGTAAGCT 001440 001441 CACAGGAGTG TGCCACAGGT GTGGAGCGTG TGCGATGGCG TGTGATCGAA GGCCGGTAAG CTCACAGGAG GGCGTCACAG 001520 001521 GTGTGGAGCG TGTGCGATGG CATGTGATTG AAGGCCGGTA AGCTCACAGG AGGGCGCCAC AGGTGTGGAG GGGAGGGCTT 001600 001601 GGAGTATCCC TGGGGCAGGA GTTGCCTGTG GCTTCTTGGA GGGGTACAGC GGAGCCCCAG GAGATGGCTA AGCTCCTAAG 001680 001681 CAGGGGAAGT AGGAGGTTGG GAATGGGATA GGGAGAGGAA GGAAAGAACA GGAAGGGTGG TGCCAGGTTG TCGGGAACCT 001760 001761 TGGAAGTAAA CTTGAGGAGT CTGACCGACT TCTCAGGGCA GTGGAAAGCA GGGCACGCTT TATTGCTG |
Predicted Small Protein
Name | NONHSAT083191_smProtein_44:172 |
Length | 43 |
Molecular weight | 4273.8178 |
Aromaticity | 0.0 |
Instability index | 100.530952381 |
Isoelectric point | 9.60931396484 |
Runs | 6 |
Runs residual | 0.0333031946956 |
Runs probability | 0.0475033857388 |
Amino acid sequence | MNQSRACAGGKNNTMSSKGACAMACDRRPVSSQEGVTGVGRV |
Secondary structure | LLLLLLLLLLLLLLLLLHHHHEEEELLLLLLLLLLLEEEEEL |
PRMN | - |
PiMo | - |