NONHSAT082335

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT082335

Source

NONCODE4.0

Same with

,

Classification

sense

Length

617 nt

Genomic location

chr21+:43934002..43946148

Exon number

4

Exons

43934002..43934034,43934741..43934827,43938387..43938620,43945886..43946148

Genome context

Sequence
000001 ctgggctgcg gagcgcgggc ctcggcggcg cagGGCTTGA CGCGCCGGAA AGTCCCCTCG CCGCTGGCCA CCAGCCTTCC 000080
000081 AGCCCTTACG GCCCACGCCG TAATCCTGGT GACCGAGAAG AGAGCAGAGC CACTGCCAGA AGGAAGGGGA CAAGACCCAG 000160
000161 CAGGACACCT TCTTTCCACG CTTTCCAGCC TGTGGGAGCG GCAGGGGCAA CAGAGAGAGG ATCTGGAGCC AGGATTAATG 000240
000241 ACTCATTTAT GAAGCATCTT ATTCTGCGAC CGAGGCTCAG TGGTCAGTGG CGACGTAAAT GGCTCGACTC CCCGCTGGCA 000320
000321 TTCGCTTCAT CATCTCATTC TCCAGGGATC AGTGGTACAG AGCCTTCATT TTTATTTTGA CATTTCTGCT GTATGCAAGT 000400
000401 TTTCACTTAT CTCGAAAGCC TATCAGCATA GTTAAGGTAA GAATCATGGA AAGCACTGCC TGTCGTCTCT GTGAGGAGTT 000480
000481 CGTCACTTGA AAAGCTTGTG GGGCAGAGGA TGGGGATGGT AGCAGGTACA TGGGGAAACA GATTATGTAG AAACAAGTTA 000560
000561 TTCTGCTGCT TTGGCTTTTC GGTTTCCCTT TGCTAAAATT AAAGTCTTTT AAATGTT
[back to top]

Predicted Small Protein

Name NONHSAT082335_smProtein_248:379
Length 44
Molecular weight 4895.6027
Aromaticity 0.116279069767
Instability index 81.0046511628
Isoelectric point 11.5537719727
Runs 7
Runs residual 0.0054873268879
Runs probability 0.0277083806495
Amino acid sequence MKHLILRPRLSGQWRRKWLDSPLAFASSSHSPGISGTEPSFLF
Secondary structure LLEEEELLLLLLHHHHHHLLLLLLEELLLLLLLLLLLLLLLLL
PRMN -
PiMo -