NONHSAT082221
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082221 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1637 nt |
Genomic location |
chr21+:41755010..41757285 |
Exon number |
3 |
Exons |
41755010..41755382,41755579..41756065,41756506..41757285 |
Genome context |
|
Sequence |
000001 CTTTGGGAGG CTGAGGCAGG CAGATCACCT AAGGCCAGGA ATTCGACACC AGCCTGGCCA ACGTGGCAAA ACCCGTCTCT 000080
000081 ACTAAAAATA CAAAAATTAG CCGGGCGTGG TGGTGTGCGC CTGGAATCCC AGCTACCCAG GAGGCTGAGG CAGGAGAAAT 000160 000161 GCTGGAACCC GGGAGGCAGA GGCTGCAGTG AGCTGAGATC ATGCCACTAC TGCACTCCAG CCTGGGTGAC ACAGCAAGAC 000240 000241 TCCCTCTAAA AAAAGAAAAA AAGAAAAGAA AAGAAAAGAA AATGATATAT CCATGATGAA TTAAAATGGA GTGGAACCCA 000320 000321 CTGATGGTAT GCAGCTGATA AGACGCTATA GAGAAATGAT ATCCGGACAC ATGACAAAGG AAAAGTAAAC CGCTGGTTTA 000400 000401 GAGTCTTTGG AAGGCAATTG TATCTGACTA GAATTTAATA TTATTGTTTT TCTTTCATTG TATTGCATTT ATCTGTATGG 000480 000481 CTAGTTAAAC TGATTTTCCA TTTAAAAGTA GTAATGCATT TTTTTATAAT TACATTGTTT TAAGTAAACA AGAATTATTC 000560 000561 AAAGGACAAA AACACTAGCA CAGATGGCAT TCAATGATTG CAGATATCAT AAAGATAGTT CATGAATGAC AAAGATTTGA 000640 000641 GAAGTACTGT GTTCACGATG CTTCCTGGAA GAGGTGGGTT ATACAGTGTT TCTTAGAGAA AGGGATAGGG GTCTACTGCT 000720 000721 AGGAGGGAAA GATGAAGCTA CTTAGGGGGA CTAGGAAACA CGCAGTTGGC CTGCCCTCTG CTTGGAGATC ACAGCCAAGG 000800 000801 AAACACAGGA GAGGCACCCC CTGGAGGAGC TCCGTGGGCT GCAGGGCTGA CGTGGCCCAG CCTGGGCAAC AAGAGCGAAA 000880 000881 CCCCATCTCA AAACCACAAC AACAACAACA GGACAACAGA GATGGACGAC GGATCGGGAA AGCCAACCAG ACAGCGTGAG 000960 000961 GCCAGGACGG AAAGAGGCAC AGGGAGCTCT GCTCAGTGTC GCTACAGGGG ATCTCTCAGG CTCACAACGG GCCACTCCTC 001040 001041 TAGGGAAGTT CTGGTCTCAT CATGATCCTT GTTTGGTCTC ACTCCCCATG TCCTTCTCTG TCCCTCCTCC AACTGCCATT 001120 001121 TATTTATTTA ACTGAAAAAG TACCAATCAC CCACATAGGC ATGACATACT CATCCATGTA CCCATTTCTT AAAATTGATC 001200 001201 ATTGTTAACA TTTGGTGTAA TTTGCTTTAT TTATTTTTAA TGAAATAAAT AAAACTTTAC AGAAAATGCT TTATTTTTCT 001280 001281 CTTTGTTCCC TCCCCATCCT ATATTTTTCT CCTAAAAAAC CCTATTATCA GAAATATTAG TGTGTATTCC CAGTTTCGAC 001360 001361 TTTTTATTTT ATTACACACA CACTCCCACA CATAGCTGTG ACAATGAACT TCACATAGTA TGGTTCTGTA TTTTCTCTTT 001440 001441 GTTTTTCAAA CTTACATAAG TATTTTACTA TTTCTCATGG AAAAACTCAC TTTTCCCATC CAACGTTATG TTTCCTTAAG 001520 001521 ATCTCTCTAT GTTGATATAA AGAAATCTAG CTCATTCTTT TTAATGAAAA TAAAGTATAT TTTATGAATG TAACTCATGC 001600 001601 TAACCATGGC AATAAAAGCT CCATCAAGCA TGCATTT |
Predicted Small Protein
Name | NONHSAT082221_smProtein_731:958 |
Length | 76 |
Molecular weight | 8522.5154 |
Aromaticity | 0.0266666666667 |
Instability index | 63.052 |
Isoelectric point | 12.0071411133 |
Runs | 9 |
Runs residual | 0.0289361702128 |
Runs probability | 0.038813323127 |
Amino acid sequence | MKLLRGTRKHAVGLPSAWRSQPRKHRRGTPWRSSVGCRADVAQPGQQERNPISKPQQQQQ DNRDGRRIGKANQTA |
Secondary structure | LLLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLHHHHLL LLLLLLEEELLLLLL |
PRMN | - |
PiMo | - |