NONHSAT082203
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082203 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
861 nt |
Genomic location |
chr21+:40974740..40981592 |
Exon number |
4 |
Exons |
40974740..40975257,40975412..40975419,40977969..40978220,40981510..40981592 |
Genome context |
|
Sequence |
000001 TGGATTTATT TCCCTTGCAT TTATTTTACT TTAGAACACC ATGACCCAAA GCAGAGCTCT TGAAACTCTA GTCCTACAAC 000080
000081 ACAATCTTTG AAAAATGGGT TTCATTTTCA GATGCTTGGG AAATATTGCA TTCCCTATGC TCCTCTTGCA CATCAATTGT 000160 000161 CAGCTCACAA TAAAGGCTCT GAGAAGGCCT GCATTATAAA ACTGTGCAGA CAGGGTCTCC CCAAGTTGTC ACACGTGAGA 000240 000241 TCCCGGACTC TGTTTAGTGG TTTTTGGTTT TTTTCTAAAT GCATTTTGAA CAGCCAGGGT ACAGACTTCC GTGAAGACCA 000320 000321 CCCTAGAATG CACAAACCAC ACAAGCCTTT CTAAGTCATG TTGTTGAGTC TGTAAAAGAG GAGGAAATTT GGGAAATGGG 000400 000401 CGGCAGGCTT TTCCTGGCCC TCAAGAGAAG AGCTCCCTCC TTTTTGCATC GATCTCCCTT TTCCATATTT ACTTTGCCTC 000480 000481 TAATTAATTT TTCTTATTGC TCTTCACCCT ATTTCTTGCA GGCTAACAAA GGATGATCAA CATATTAAGC CAACACTCCA 000560 000561 GAATGTATAG GCTTCCAATC AATGCGCTGT CTTGCAAATG GTCCCAGAAC TACCCTCTCT TCAATATACC TCTTTTGACA 000640 000641 GAGCTCAGCG TACAGGAAAA TCTCCTCAAA TGCAGAAATT TGAGTGTGAA TTTAATTTTC AGTGCATCAA AAAATCATTT 000720 000721 AGCACTAGGA AGATAGCCTC TCTGACAGGA ACGGTGTGTA CCTCTAAAGA ATGGGTTCCT ATTTAAGTAT TGCTCCAGCA 000800 000801 TTCCCTGTGT GCCAGGCGGA GGTCTCTGCT GGGGTGCAGT GGTGCACCCT GAAGTCCCGT T |
Predicted Small Protein
Name | NONHSAT082203_smProtein_395:535 |
Length | 47 |
Molecular weight | 5251.139 |
Aromaticity | 0.173913043478 |
Instability index | 86.8717391304 |
Isoelectric point | 11.0065307617 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0412373157472 |
Amino acid sequence | MGGRLFLALKRRAPSFLHRSPFSIFTLPLINFSYCSSPYFLQANKG |
Secondary structure | LLHHHHHHHHHHLLLLLLLLLLLEEELLLLLLEELLLLLEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooo |