NONHSAT082170
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082170 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
793 nt |
Genomic location |
chr21-:40714730..40720549 |
Exon number |
7 |
Exons |
40714730..40715085,40717072..40717200,40719173..40719218,40719305..40719409,40720218..40720265,40720348..40720377,40720471..40720549 |
Genome context |
|
Sequence |
000001 CCTGGGACTG CGGCCCGCCT CTATTCGTGC GTCTCCGTCT CCGCAGGTCA GCTCCGCCGA AGGCGCCGCC AAGGAAGAGC 000080
000081 CCAAGAGGAG ATCGGCGCGG TTGTCAGCTA AACCTCCTGC AAAAGTGGAA GCGAAGCCGA AAAAGGCAGC AGCGAAGTGT 000160 000161 AGGTAGAAGT TTAGCACTGC AGTCATCAGA AGAGGCAAGA TTAATTTCCT TGACATTGAG GAGTTGTTGG ATAATTACTA 000240 000241 AATTTGTCCT TGTTAAATAA AGAAAGTTCT GTTTTTGTGA TCCTTTTAAA AATAAAGCTT CACGGAAGGA TAAATCTTCA 000320 000321 GACAAAAAAG TGCAAACAAA AGGGAAAAGG GGAGCAAAGG GAAAACAGGC CGAAGTGGCT AACCAAGAAA CTAAAGAAGA 000400 000401 CTTACCTGCG GAAAACGGGG AAACGAAGAC TGAGGAGAGT CCAGCCTCTG ATGAAGCAGG AGAGAAAGAA GCCAAGTCTG 000480 000481 ATTAATAACC ATATACCATG TCTTATCAGT GGTCCCTGTC TCCCTTCTTG TACAATCCAG AGGAATATTT TTATCAACTA 000560 000561 TTTTGTAAAT GCAAGTTTTT TAGTAGCTCT AGAAACATTT TTAAGAAGGA GGGAATCCCA CCTCATCCCA TTTTTTAAGT 000640 000641 GTAAATGCTT TTTTTTAAGA GGTGAAATCA TTTGCTGGTT GTTTATTTTT TGGTACAACC AGAAAATAGT GTGGGATATT 000720 000721 GAATTATGGG AGGCTCTGAC TGTCTCGGGT GTCAGCTTAA CATTCCACAG ATGGGGGGTT AGTTTTTATA TCC |
Predicted Small Protein
Name | NONHSAT082170_smProtein_497:637 |
Length | 47 |
Molecular weight | 5646.4729 |
Aromaticity | 0.260869565217 |
Instability index | 73.0176086957 |
Isoelectric point | 8.68499755859 |
Runs | 9 |
Runs residual | 0.0342908902692 |
Runs probability | 0.0425621700131 |
Amino acid sequence | MSYQWSLSPFLYNPEEYFYQLFCKCKFFSSSRNIFKKEGIPPHPIF |
Secondary structure | LLEEEELLLLLLLLHHHHHHHHHHLEEEELLHHHHHHLLLLLLLLL |
PRMN | - |
PiMo | - |