NONHSAT082008
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT082008 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
648 nt |
Genomic location |
chr21-:38441567..38445023 |
Exon number |
2 |
Exons |
38441567..38441924,38444734..38445023 |
Genome context |
|
Sequence |
000001 TGTTGCGGGG CGCGCGCCAG CCTGGGTGTC TGTATGCGCT CGAGGCGGGG GCGCGGGTTG CGGACGGAGG CGCGGGAGGC 000080
000081 GGTTCTGCGC GGCGGGGGCC GTACCCGCGG CGGAGCGAGG AGGCGAGAAT GGATCAATGG TGCCACGGAG CACATCGCTG 000160 000161 GCGCTGATTG TGTTCCTTTT CCACAGATTG TCTAAAGCCC CAGGAAAAAT GGTGGAAAAT TCACCGTCGC CATTGCCAGA 000240 000241 AAGAGCGATT TATGGCTTTG TTCTTTTCTT AAGCTCCCAA TTTGGCTTCA TACTTTACCT CGTGTGGGCC TTTATTCCTG 000320 000321 AATCTTGGCT AAACTCTTTA GGTTTAACCT ATTGGCCTCA AAAGTAAGTT TAATATATTT CTTAAATGAG GATATAATTA 000400 000401 ATGCTGTTTT GAGGAGTCAT ATCATTTCTT AAACCTACCC AAATCTTAAA TATTTGTTCT CTTAAAATTC ATGAATAGCC 000480 000481 ATATAGAAAT TGAAAGCTTT TTAAAGATCG CTATTGATAC ATCtctaatt aaagatggta gcatgaacac acatgtttat 000560 000561 ctccatccat ttcctccaaa aatcttgtta aaatgaccct acaggaaaaa aaaaaaaaac tgaagataca aaccacagaa 000640 000641 acaatagt |
Predicted Small Protein
Name | NONHSAT082008_smProtein_470:595 |
Length | 42 |
Molecular weight | 4692.4996 |
Aromaticity | 0.0731707317073 |
Instability index | 51.4609756098 |
Isoelectric point | 6.81268310547 |
Runs | 7 |
Runs residual | 0.00523716893611 |
Runs probability | 0.0456002220708 |
Amino acid sequence | MNSHIEIESFLKIAIDTSLIKDGSMNTHVYLHPFPPKILLK |
Secondary structure | LLLHHHHHHHHHHHHLHHHHLLLLLLLEEEELLLLLLLLLL |
PRMN | - |
PiMo | - |