NONHSAT081816

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081816

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1663 nt

Genomic location

chr21+:35014790..35147140

Exon number

13

Exons

35014790..35015019,35091103..35091161,35093484..35093575,35094894..35094956,35107350..35107509,35122449..35122627,35124116..35124211,35127603..35127702,35134228..35134290,35138180..35138316,35140018..35140132,35144366..35144627,35147034..35147140

Genome context

Sequence
000001 GGGAGGGAGC GAAGGAGGTA GAGAAGAGTG GAGGCGCCAG GGGAGGGAGC GTAGCTTGGT TGCTCCGTAG TACGGCGGCT 000080
000081 CGCGAGGAAG AATCCCGAGC GGGCTCCGGG ACGGACAGAG AGGCGGGCGG GGATGGTGTG CGGGGCTGCG GCTCCTGCGT 000160
000161 CCCTCCCAGC GGCGCGTGAG CGGCACTGAT TTGTCCCTGG GGCGGCAGCG CGGACCCGCC CGGAGATGAG CGTCGATTAG 000240
000241 CAAGGTAAAA GTAACAGAAC CATGGCTCAG TTTCCAACAC CTTTTGGTGC AGCCTGGATA TCTGGGCCAT AACTGTAGAG 000320
000321 GAAAGAGCGA AGCATGATCA GCAGTTCCAT AGTTTAAAGC CAATATCTGG ATTCATTACT GTGATCAAGC TAGAAACTTT 000400
000401 TTTTTTCAAT CTGGGTTACC TCAACCTGTT TTAGCACAGA TATGGCACTA GCTGACATGA ATAATGATGG AAGAATGGAT 000480
000481 CAAGTGGAGT TTTCCATAGC TATGAAACTT ATCAAACTGA AGCTACAAGG ATATCAGCTA CCCTCTGCAC TTCCCCCTGT 000560
000561 CATGAAACAG CAACCAGTTG CTATTTCTAG CGCACCAGCA TTTGTATGGG AGGTATCGCC AGCATGCCAC CGCTTACAGC 000640
000641 TGTTGCTCCA GTGCCAATGG GATCCATTCC AGTTGTTGGA ATGTCTCCAA CCCTAGTATC TTCTGTTCCC ACAGCAGCTG 000720
000721 TGCCCCCCCT GGCTAACGGG GCTCCCCCTG TTATACAACC TCTGCCTGCA TTTGCTCATC CTGAGCCACA TTGCCAAAGA 000800
000801 GTTCTTCCTT TAGTAGATCT GGTCCAGGGT CACAACTAAA CACTAAATTA CAAAAGGCAC AGTCATTTGA TGTGGCCAGG 000880
000881 TCCCACCAGT GGCAGAGTGG GCTGTTCCTC AGTCATCAAG ACTGAAATAC AGGCAATTAT TCAATAGTCA TGACAAAACT 000960
000961 ATGAGTGGAC ACTTAACAGT CCCCAAGCAA GAACTATTCT TATGCAGTCA AGTTTACCAC AGGCTCAGCT GGCTTCAATA 001040
001041 TGAATCTTTC TGACATTGAT CAAGATGGAA AACTTACAGC AGAGGAATTT ATCCTGGCAA TGCACCTCAT TGATGTAGCT 001120
001121 ATGTCTGGCC AACCACTGCC ACCTGTCCTG CCTCCAGAAT ACATTCCACC TTCTTTTAGA GAGTTCGATC TGGCAGTGGT 001200
001201 ATATCTGTCA TAAGCTCAAC ATCTGTAGAT CAGAGGCTAC CAGAGGAACC AGTTTTAGAA GATGAACAAC AACAATTAGA 001280
001281 AAAGAAATTA CCTGAACGTT TGAAGATAAG AAGCGGGAGA ACTTTGAACG TGGCAACCTG GAACTGGAGA AACGAAGGCA 001360
001361 AGCTCTCCTG GAACAGCAGC GCAAGGAGCA GGAGCGCCTG GCCCAGCTGG AGCGGGCGGA GCAGGAGAGG AAGGAGCGTG 001440
001441 AGCGCCAGGA GCAAGAGCGC AAAAGACAAC TGGAACTGGA GAAGCAACTG GAAAAGCAGC GGGAGCTAGA ACGGCAGAGA 001520
001521 GAGGAGGAGA GGAGGAAAGA AATTGAGAGG CGAGAGCTGC AAAACGGGAA CTTGAAAGGC AACGACAACT TGAGTGGGAA 001600
001601 CGGAATCGAA GGCAAGAACT ACTAAATCAA AGAAACAAAG AACAAGAGGA CATAGTTGTA CTG
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Predicted Small Protein

Name NONHSAT081816_smProtein_605:838
Length 78
Molecular weight 7714.0811
Aromaticity 0.012987012987
Instability index 65.425974026
Isoelectric point 6.20831298828
Runs 13
Runs residual 0.0327498588368
Runs probability 0.0273939097469
Amino acid sequence MGGIASMPPLTAVAPVPMGSIPVVGMSPTLVSSVPTAAVPPLANGAPPVIQPLPAFAHPE
PHCQRVLPLVDLVQGHN
Secondary structure LLLEELLLLLEEEELLLLLLEEEELLLLEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLL
LLLLEELLHHHHHLLLL
PRMN -
PiMo -